Orthogroup:group_948



Homologs in group_948

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05175 FBDBKF_05175 Morganella morganii S1 trpB tryptophan synthase subunit beta
EHELCC_12415 EHELCC_12415 Morganella morganii S2 trpB tryptophan synthase subunit beta
NLDBIP_12755 NLDBIP_12755 Morganella morganii S4 trpB tryptophan synthase subunit beta
LHKJJB_12615 LHKJJB_12615 Morganella morganii S3 trpB tryptophan synthase subunit beta
HKOGLL_11230 HKOGLL_11230 Morganella morganii S5 trpB tryptophan synthase subunit beta
F4V73_RS05630 F4V73_RS05630 Morganella psychrotolerans trpB tryptophan synthase subunit beta
PMI_RS06500 PMI_RS06500 Proteus mirabilis HI4320 trpB tryptophan synthase subunit beta

Distribution of group_948 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_948 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_948

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_948.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trpB 7

Product

# Product Occurence
1 tryptophan synthase subunit beta 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0133 7 E Amino acid transport and metabolism (E) Tryptophan synthase beta chain

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00291 7 Pyridoxal-phosphate dependent enzyme

Annotations of the 468 SwissProt hits

Annotation Number of occurrences
Cysteine synthase 9
L-threonine dehydratase biosynthetic IlvA 2
Probable 1-aminocyclopropane-1-carboxylate deaminase 1
Threonine synthase 1
Tryptophan synthase 5
Tryptophan synthase beta chain 408
Tryptophan synthase beta chain (Fragment) 2
Tryptophan synthase beta chain 1 17
Tryptophan synthase beta chain 1 (Fragment) 1
Tryptophan synthase beta chain 1, chloroplastic 1
Tryptophan synthase beta chain 2 18
Tryptophan synthase beta chain 2, chloroplastic 2
Tryptophan synthase beta chain 2, chloroplastic (Fragment) 1

Protein length

Unique protein length 396

Protein length distribution