Homologs in group_1139

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06520 FBDBKF_06520 77.4 Morganella morganii S1 thrC threonine synthase
EHELCC_09565 EHELCC_09565 77.4 Morganella morganii S2 thrC threonine synthase
NLDBIP_09945 NLDBIP_09945 77.4 Morganella morganii S4 thrC threonine synthase
LHKJJB_07810 LHKJJB_07810 77.4 Morganella morganii S3 thrC threonine synthase
HKOGLL_07360 HKOGLL_07360 77.4 Morganella morganii S5 thrC threonine synthase
F4V73_RS15410 F4V73_RS15410 76.3 Morganella psychrotolerans thrC threonine synthase

Distribution of the homologs in the orthogroup group_1139

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1139

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27735 0.0 715 80 0 425 3 thrC Threonine synthase Serratia marcescens
P00934 0.0 674 78 0 425 1 thrC Threonine synthase Escherichia coli (strain K12)
P44503 0.0 589 65 1 426 3 thrC Threonine synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q89AR5 0.0 575 62 2 430 3 thrC Threonine synthase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8K9V1 0.0 575 62 2 429 3 thrC Threonine synthase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57289 0.0 574 63 2 429 3 thrC Threonine synthase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P29363 6.33e-78 252 34 13 462 3 thrC Threonine synthase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P16120 3.34e-65 220 32 16 495 1 THR4 Threonine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q00063 9.21e-62 211 32 13 445 3 THR4 Threonine synthase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
P37145 9.66e-60 205 29 10 475 3 thrC Threonine synthase Methylobacillus glycogenes
Q42598 3.56e-58 201 31 14 476 1 thrc Threonine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P23669 3.19e-52 185 27 13 461 1 thrC Threonine synthase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q2YDP8 1.06e-51 183 30 13 449 2 thnsl2 Threonine synthase-like 2 Danio rerio
Q9BH05 2.02e-46 173 30 16 433 2 THNSL1 Threonine synthase-like 1 Macaca fascicularis
Q5R5P3 2.28e-46 173 30 16 433 2 THNSL1 Threonine synthase-like 1 Pongo abelii
Q8IYQ7 2.44e-46 173 30 16 433 1 THNSL1 Threonine synthase-like 1 Homo sapiens
Q8BH55 5.37e-46 172 30 16 443 1 Thnsl1 Threonine synthase-like 1 Mus musculus
Q5XH07 1.02e-45 167 27 12 455 2 thnsl2 Threonine synthase-like 2 Xenopus laevis
Q5RFE6 6.64e-41 154 29 13 419 2 THNSL2 Threonine synthase-like 2 Pongo abelii
Q86YJ6 2.66e-39 150 28 13 419 1 THNSL2 Threonine synthase-like 2 Homo sapiens
Q80W22 2.67e-39 150 27 12 459 1 Thnsl2 Threonine synthase-like 2 Mus musculus
Q5M7T9 2.16e-38 148 28 12 420 2 Thnsl2 Threonine synthase-like 2 Rattus norvegicus
O24924 2.76e-38 147 28 14 416 3 thrC Threonine synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZMX5 3.66e-37 144 28 14 416 3 thrC Threonine synthase Helicobacter pylori (strain J99 / ATCC 700824)
Q9SSP5 8.99e-09 60 26 16 307 1 TS2 Threonine synthase 2, chloroplastic Arabidopsis thaliana
Q9MT28 9.94e-09 60 26 16 306 2 None Threonine synthase, chloroplastic Solanum tuberosum
Q9S7B5 2.2e-08 59 25 16 306 1 TS1 Threonine synthase 1, chloroplastic Arabidopsis thaliana
P04990 0.000114 47 25 12 280 3 thrC Threonine synthase Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00015
Feature type CDS
Gene thrC
Product threonine synthase
Location 3732 - 5024 (strand: 1)
Length 1293 (nucleotides) / 430 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1139
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00291 Pyridoxal-phosphate dependent enzyme
PF14821 Threonine synthase N terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0498 Amino acid transport and metabolism (E) E Threonine synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MKLYNLKDNQEQVSFAQAVKQGLGKQQGLFFPKDLPSFSQAEIDALLKLDFATRSSRILSAFIGDEIPADVLAKRVNTAFAFPAPVTQVEEDISCLELFHGPTLAFKDFGGRFMAQMLSEVAGDQPVTILTATSGDTGAAVAHAFYKLDNVQVVILYPQGKISPLQEKLFCTLGENIHTVAIQDDFDACQALVKQAFDDEYLKNTMHLNSANSINISRLLAQICYYFEAVAQIPAEKRQQLVISVPSGNFGDLTAGLLAKSMGLPVKRFIAATNVNDTVPRYLDSGKWEPHRTIATLSNAMDVSQPNNWPRIEELYRRKGWLLSDLSHGAVSDETTEKTVRELAQKGYISEPHAAVAYRLLRDELQEGEYGVFLGTAHPAKFKENVERILGDTLPLPKELAERADKKLLSHLLPADFSQLRAFLLERAPK

Flanking regions ( +/- flanking 50bp)

TACACATCTGCCGTTTAGATACTCGTGGCGCAAGAGAGATAGGGTAAGTAATGAAATTATATAATTTAAAAGATAACCAAGAACAAGTCAGCTTTGCTCAAGCTGTTAAACAAGGTTTAGGAAAACAGCAAGGACTCTTTTTTCCCAAAGACTTGCCTTCATTTTCTCAAGCAGAAATTGATGCGCTATTAAAATTAGACTTTGCAACACGCAGTAGCCGTATTTTAAGTGCTTTTATCGGTGATGAAATTCCTGCTGATGTGTTAGCAAAACGTGTAAATACGGCATTTGCTTTTCCTGCGCCAGTGACACAAGTAGAAGAGGATATTAGTTGCCTTGAACTCTTCCACGGACCGACGCTGGCTTTTAAAGACTTTGGTGGCCGTTTTATGGCTCAAATGTTATCAGAAGTCGCGGGTGACCAGCCTGTTACAATTTTAACGGCGACATCCGGTGATACAGGAGCAGCGGTCGCTCATGCTTTCTATAAGCTAGATAATGTCCAGGTCGTGATCCTCTATCCACAAGGAAAAATCAGCCCATTACAAGAAAAGCTATTTTGCACATTAGGGGAGAATATTCATACTGTTGCTATTCAAGATGACTTTGATGCTTGCCAAGCATTAGTCAAACAGGCATTTGATGATGAATATTTAAAGAACACCATGCATTTAAACTCGGCTAACTCGATTAATATTAGCCGCCTACTGGCACAAATCTGCTATTACTTTGAAGCGGTTGCACAAATTCCAGCTGAAAAACGTCAACAATTAGTCATTTCTGTACCAAGTGGTAATTTTGGTGATCTCACTGCAGGATTACTGGCTAAATCTATGGGATTACCTGTTAAACGCTTTATTGCAGCGACCAATGTGAATGATACCGTTCCTCGCTATTTAGATAGTGGTAAATGGGAACCACATCGGACAATAGCAACACTTTCAAATGCGATGGATGTTAGCCAGCCTAATAATTGGCCTCGTATTGAAGAGTTATATCGTCGCAAAGGTTGGCTGTTATCGGATCTTTCGCATGGGGCTGTGAGCGATGAAACGACGGAAAAAACTGTACGTGAACTGGCACAAAAAGGCTATATTTCAGAGCCTCATGCGGCGGTTGCTTATCGTCTATTACGTGATGAGCTACAAGAAGGAGAATATGGGGTATTTTTAGGTACAGCTCATCCGGCGAAATTTAAAGAAAATGTCGAGCGTATTTTAGGTGATACATTACCTTTACCAAAAGAATTAGCTGAGCGTGCTGATAAAAAATTACTATCGCATCTTTTACCGGCAGATTTTTCTCAATTAAGAGCATTTTTGTTAGAACGAGCACCTAAATAAATATAATTATTTATATTAATTAATTTTGTTTTTATTAAAAAGCTCACTAT