Homologs in group_1139

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06520 FBDBKF_06520 93.0 Morganella morganii S1 thrC threonine synthase
EHELCC_09565 EHELCC_09565 93.0 Morganella morganii S2 thrC threonine synthase
NLDBIP_09945 NLDBIP_09945 93.0 Morganella morganii S4 thrC threonine synthase
LHKJJB_07810 LHKJJB_07810 93.0 Morganella morganii S3 thrC threonine synthase
HKOGLL_07360 HKOGLL_07360 93.0 Morganella morganii S5 thrC threonine synthase
PMI_RS00015 PMI_RS00015 76.3 Proteus mirabilis HI4320 thrC threonine synthase

Distribution of the homologs in the orthogroup group_1139

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1139

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27735 0.0 667 76 0 425 3 thrC Threonine synthase Serratia marcescens
P00934 0.0 645 76 0 426 1 thrC Threonine synthase Escherichia coli (strain K12)
P44503 0.0 592 67 1 427 3 thrC Threonine synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8K9V1 0.0 550 59 2 428 3 thrC Threonine synthase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57289 0.0 549 60 2 428 3 thrC Threonine synthase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AR5 0.0 542 59 2 428 3 thrC Threonine synthase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P29363 4.07e-70 232 33 11 462 3 thrC Threonine synthase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P16120 3.6e-69 231 33 15 495 1 THR4 Threonine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q00063 3.83e-66 223 34 13 443 3 THR4 Threonine synthase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
Q42598 6.8e-62 211 32 15 488 1 thrc Threonine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P37145 4.93e-59 203 30 10 476 3 thrC Threonine synthase Methylobacillus glycogenes
Q2YDP8 5.25e-49 176 31 14 425 2 thnsl2 Threonine synthase-like 2 Danio rerio
P23669 1.45e-48 175 27 11 475 1 thrC Threonine synthase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q5XH07 1.57e-43 161 30 8 358 2 thnsl2 Threonine synthase-like 2 Xenopus laevis
Q5R5P3 7.85e-42 160 28 12 443 2 THNSL1 Threonine synthase-like 1 Pongo abelii
Q80W22 1.14e-41 157 30 12 419 1 Thnsl2 Threonine synthase-like 2 Mus musculus
Q9BH05 1.37e-41 160 28 14 444 2 THNSL1 Threonine synthase-like 1 Macaca fascicularis
Q5M7T9 2.52e-41 155 31 14 421 2 Thnsl2 Threonine synthase-like 2 Rattus norvegicus
Q8IYQ7 2.75e-41 159 28 14 444 1 THNSL1 Threonine synthase-like 1 Homo sapiens
Q8BH55 1.04e-40 157 29 15 434 1 Thnsl1 Threonine synthase-like 1 Mus musculus
Q5RFE6 5.1e-40 152 30 13 420 2 THNSL2 Threonine synthase-like 2 Pongo abelii
Q86YJ6 2.55e-38 147 29 13 420 1 THNSL2 Threonine synthase-like 2 Homo sapiens
Q9ZMX5 1.97e-34 137 27 13 426 3 thrC Threonine synthase Helicobacter pylori (strain J99 / ATCC 700824)
O24924 3.42e-32 130 25 12 417 3 thrC Threonine synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9MT28 4.81e-10 65 26 15 304 2 None Threonine synthase, chloroplastic Solanum tuberosum
Q9S7B5 8.19e-10 64 25 17 343 1 TS1 Threonine synthase 1, chloroplastic Arabidopsis thaliana
Q9SSP5 6.63e-08 58 25 14 305 1 TS2 Threonine synthase 2, chloroplastic Arabidopsis thaliana
P09123 0.000493 45 27 5 154 3 thrC Threonine synthase Bacillus sp. (strain ULM1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15410
Feature type CDS
Gene thrC
Product threonine synthase
Location 68850 - 70142 (strand: 1)
Length 1293 (nucleotides) / 430 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1139
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00291 Pyridoxal-phosphate dependent enzyme
PF14821 Threonine synthase N terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0498 Amino acid transport and metabolism (E) E Threonine synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MELYNLKDESEKVSFAQAVKQGLGRGQGLFFPRDLPFFDSEAMDNLLAMDFVSRSVVILHALIGDEIPRAELDTRVRAAFAFPAPLKPVESDVSCLELFHGPTLAFKDFGGRFMAQALAAVAGDKPVTILTATSGDTGAAVAHAFYGLKNVQVVILYPQGKISPLQEKLFCTLGKNIHTVAVQDDFDACQALVKQAFDDEELKQVLHLNSANSINISRLLAQICYYFEAVAQAPAEKRGELVFSVPSGNFGDLTAGVLAKAMGLPVKRFIAATNANDTVPRYLADGQWKPAVTVATLSNAMDVSQPNNWPRIEALFARQGWSLRDLRSGAVNDDETRETMRELMGKGYISEPHAAIAYRLLRKDLQPGEYGIFLGTAHPAKFLESVEAILEQKLPLPAELAERADLPLLSAVLPADFAALRDYLMKTVKP

Flanking regions ( +/- flanking 50bp)

TGCCGCCTGGATCTCGCGGGCGCACGACAAGTGAGTGCATAAGGTTAAAAATGGAACTGTACAATTTAAAAGACGAAAGCGAAAAAGTCAGTTTTGCGCAGGCAGTAAAACAAGGTCTGGGGCGTGGTCAGGGGCTGTTTTTCCCGCGTGACCTGCCGTTCTTTGATTCTGAGGCGATGGATAACCTGCTGGCAATGGATTTTGTCAGCCGCAGTGTGGTTATCCTGCATGCACTGATTGGTGATGAAATTCCCCGGGCAGAGCTGGATACGCGTGTCCGCGCCGCGTTTGCTTTCCCGGCACCGCTGAAACCGGTGGAAAGTGATGTGAGCTGCCTGGAACTGTTTCATGGCCCGACCCTGGCGTTTAAAGATTTCGGCGGGCGCTTTATGGCGCAGGCGCTGGCAGCGGTTGCCGGAGATAAACCCGTTACTATTCTGACGGCAACCTCCGGTGATACCGGGGCGGCTGTCGCACATGCCTTTTATGGTCTGAAAAATGTGCAGGTGGTTATCCTTTATCCGCAGGGGAAAATCAGCCCGTTACAGGAAAAACTGTTCTGCACATTGGGTAAAAATATTCATACGGTAGCTGTACAGGATGATTTCGATGCCTGTCAGGCGCTGGTAAAACAGGCGTTTGATGATGAAGAGCTGAAACAGGTGCTGCATCTCAATTCGGCGAACTCGATTAACATCAGCCGTCTGCTGGCGCAGATTTGCTATTACTTTGAAGCGGTGGCACAGGCTCCGGCAGAAAAACGCGGCGAACTGGTCTTTTCTGTCCCGAGCGGAAATTTCGGCGACCTGACCGCAGGGGTTCTGGCGAAAGCAATGGGCTTGCCGGTGAAGCGTTTTATCGCCGCCACCAATGCCAATGACACGGTGCCGCGCTATCTGGCAGACGGACAGTGGAAACCGGCGGTGACTGTTGCCACGCTGTCTAATGCGATGGATGTCAGCCAGCCGAATAACTGGCCGCGGATTGAAGCGCTGTTTGCGCGTCAGGGTTGGTCATTGCGTGATTTGCGTTCCGGTGCGGTAAATGATGATGAAACCCGGGAAACAATGCGCGAACTGATGGGGAAAGGCTATATATCTGAACCGCATGCCGCTATTGCGTATCGCTTGCTGCGTAAAGATTTACAGCCCGGGGAGTACGGTATTTTCCTCGGCACGGCACATCCGGCAAAATTCCTGGAGAGCGTGGAAGCCATTCTTGAGCAAAAATTGCCGTTACCGGCAGAGCTGGCGGAGCGGGCAGATCTGCCGCTGCTGTCTGCGGTATTACCGGCAGATTTTGCAGCACTGCGTGACTATTTAATGAAGACAGTGAAGCCGTAATTTTTTTTTACCGGTAAAAAAACAGCCGCGCAGGTAATTATCAGCGCGGC