Orthogroup:group_2931



Homologs in group_2931

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14390 FBDBKF_14390 Morganella morganii S1 dsdA D-serine ammonia-lyase
EHELCC_07890 EHELCC_07890 Morganella morganii S2 dsdA D-serine ammonia-lyase
NLDBIP_08215 NLDBIP_08215 Morganella morganii S4 dsdA D-serine ammonia-lyase
LHKJJB_06050 LHKJJB_06050 Morganella morganii S3 dsdA D-serine ammonia-lyase
HKOGLL_04865 HKOGLL_04865 Morganella morganii S5 dsdA D-serine ammonia-lyase
PMI_RS00900 PMI_RS00900 Proteus mirabilis HI4320 - D-serine ammonia-lyase

Distribution of group_2931 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2931 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2931

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2931.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dsdA 5
2 - 1

Product

# Product Occurence
1 D-serine ammonia-lyase 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3048 6 E Amino acid transport and metabolism (E) D-serine dehydratase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01753 6 D-serine dehydratase [EC:4.3.1.18] Glycine, serine and threonine metabolism
D-Amino acid metabolism
Metabolic pathways
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00291 6 Pyridoxal-phosphate dependent enzyme

Annotations of the 109 SwissProt hits

Annotation Number of occurrences
D-serine dehydratase 41
D-serine dehydratase 1 2
D-serine dehydratase 2 2
Probable D-serine dehydratase 63
Threonine dehydratase 2 biosynthetic, chloroplastic 1

Protein length

Min length 442
Max length 444
Mean length (sd) 443.7 (0.8)
Median length 444.0

Protein length distribution