COG1280

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG1280
Protein list: lists the 70 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description Threonine/homoserine/homoserine lactone efflux protein
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG1280 is associated with 70 different proteins
The 70 proteins are classified into 12 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2509 FBDBKF_00940 172335 172982 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
1 group_223 FBDBKF_01245 239314 239952 -1 leuE leucine efflux protein LeuE Morganella morganii S1
2 group_674 FBDBKF_01830 53153 53761 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
3 group_3206 FBDBKF_02595 216077 216274 -1 L-lysine permease Morganella morganii S1
4 group_3212 FBDBKF_02765 249654 250289 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
5 group_3254 FBDBKF_05715 148309 148929 1 rhtB homoserine/homoserine lactone efflux protein Morganella morganii S1
6 group_2728 FBDBKF_06285 89305 89919 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
7 group_2872 FBDBKF_10675 103158 103790 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
8 group_309 FBDBKF_11820 15984 16643 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
9 group_3071 FBDBKF_18780 1669 2319 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
10 group_2457 FBDBKF_19625 9392 10027 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S1
11 group_223 EHELCC_00300 68916 69554 1 leuE leucine efflux protein LeuE Morganella morganii S2
12 group_2509 EHELCC_00605 135886 136533 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
13 group_674 EHELCC_02300 440973 441581 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
14 group_3206 EHELCC_03065 603897 604094 -1 L-lysine permease Morganella morganii S2
15 group_3212 EHELCC_03235 637474 638109 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
16 group_2728 EHELCC_09330 89877 90491 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
17 group_3254 EHELCC_11875 32565 33185 -1 rhtB homoserine/homoserine lactone efflux protein Morganella morganii S2
18 group_309 EHELCC_14485 118062 118721 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
19 group_2872 EHELCC_15010 103148 103780 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
20 group_2457 EHELCC_16915 44619 45254 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
21 group_3071 EHELCC_16975 1670 2320 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S2
22 group_3212 NLDBIP_00225 42027 42662 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
23 group_3206 NLDBIP_00395 76042 76239 1 L-lysine permease Morganella morganii S4
24 group_674 NLDBIP_01160 238555 239163 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
25 group_2509 NLDBIP_02855 543603 544250 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
26 group_223 NLDBIP_03160 610582 611220 -1 leuE leucine efflux protein LeuE Morganella morganii S4
27 group_2728 NLDBIP_09710 89877 90491 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
28 group_3254 NLDBIP_12215 32520 33140 -1 rhtB homoserine/homoserine lactone efflux protein Morganella morganii S4
29 group_2872 NLDBIP_14840 103148 103780 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
30 group_309 NLDBIP_15580 121999 122658 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
31 group_2457 NLDBIP_17535 10512 11147 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
32 group_3071 NLDBIP_18355 1669 2319 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S4
33 group_674 LHKJJB_00875 153522 154130 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
34 group_3206 LHKJJB_01640 316446 316643 -1 L-lysine permease Morganella morganii S3
35 group_3212 LHKJJB_01810 350023 350658 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
36 group_2509 LHKJJB_04370 150844 151491 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
37 group_223 LHKJJB_04675 217823 218461 -1 leuE leucine efflux protein LeuE Morganella morganii S3
38 group_2728 LHKJJB_08045 126747 127361 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
39 group_3071 LHKJJB_09270 190010 190660 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
40 group_3254 LHKJJB_12075 32565 33185 -1 rhtB homoserine/homoserine lactone efflux protein Morganella morganii S3
41 group_2872 LHKJJB_14505 37946 38578 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
42 group_309 LHKJJB_15030 15984 16643 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
43 group_2457 LHKJJB_17455 10512 11147 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S3
44 group_674 HKOGLL_00915 159033 159641 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
45 group_3206 HKOGLL_01680 321957 322154 -1 L-lysine permease Morganella morganii S5
46 group_3212 HKOGLL_01850 355534 356169 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
47 group_223 HKOGLL_02370 69121 69759 1 leuE leucine efflux protein LeuE Morganella morganii S5
48 group_2509 HKOGLL_02675 136091 136738 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
49 group_2728 HKOGLL_07595 126747 127361 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
50 group_3071 HKOGLL_08820 190010 190660 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
51 group_3254 HKOGLL_10690 32565 33185 -1 rhtB homoserine/homoserine lactone efflux protein Morganella morganii S5
52 group_2872 HKOGLL_13125 37946 38578 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
53 group_309 HKOGLL_14150 2647 3306 -1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
54 group_2457 HKOGLL_17270 10512 11147 1 rhtB Threonine/homoserine/homoserine lactone efflux protein Morganella morganii S5
55 group_674 F4V73_RS04155 877397 878005 -1 LysE family translocator Morganella psychrotolerans
56 group_2509 F4V73_RS06935 1438613 1439257 1 LysE family translocator Morganella psychrotolerans
57 group_223 F4V73_RS07285 1520327 1520965 -1 leuE leucine efflux protein LeuE Morganella psychrotolerans
58 group_2457 F4V73_RS10420 196983 197618 -1 LysE family transporter Morganella psychrotolerans
59 group_2457 F4V73_RS13380 306749 307363 1 LysE family translocator Morganella psychrotolerans
60 group_3071 F4V73_RS13815 397759 398409 1 LysE family transporter Morganella psychrotolerans
61 group_2872 F4V73_RS14390 106286 106918 1 LysE family translocator Morganella psychrotolerans
62 group_309 F4V73_RS14830 201067 201669 1 LysE family translocator Morganella psychrotolerans
63 group_2728 F4V73_RS15635 124172 124786 -1 LysE family transporter Morganella psychrotolerans
64 group_4839 PMI_RS04000 900326 900598 -1 LysE family transporter Proteus mirabilis HI4320
65 group_223 PMI_RS05970 1310674 1311321 1 leuE leucine efflux protein LeuE Proteus mirabilis HI4320
66 group_309 PMI_RS06140 1346630 1347229 1 LysE family transporter Proteus mirabilis HI4320
67 group_223 PMI_RS06575 1440196 1440864 1 leuE leucine efflux protein LeuE Proteus mirabilis HI4320
68 group_674 PMI_RS06930 1516140 1516751 1 LysE family translocator Proteus mirabilis HI4320
69 group_309 PMI_RS13905 3090150 3090755 -1 LysE family translocator Proteus mirabilis HI4320