Homologs in group_2702

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06285 FBDBKF_06285 92.2 Morganella morganii S1 rhtB Threonine/homoserine/homoserine lactone efflux protein
EHELCC_09330 EHELCC_09330 92.2 Morganella morganii S2 rhtB Threonine/homoserine/homoserine lactone efflux protein
NLDBIP_09710 NLDBIP_09710 92.2 Morganella morganii S4 rhtB Threonine/homoserine/homoserine lactone efflux protein
LHKJJB_08045 LHKJJB_08045 92.2 Morganella morganii S3 rhtB Threonine/homoserine/homoserine lactone efflux protein
HKOGLL_07595 HKOGLL_07595 92.2 Morganella morganii S5 rhtB Threonine/homoserine/homoserine lactone efflux protein

Distribution of the homologs in the orthogroup group_2702

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2702

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O05406 3.31e-32 118 33 2 201 3 yrhP Uncharacterized membrane protein YrhP Bacillus subtilis (strain 168)
Q9L6N7 9.51e-26 101 30 3 199 3 rhtC Threonine efflux protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z3B3 1.01e-25 101 30 3 199 3 rhtC Threonine efflux protein Salmonella typhi
P0AG38 3.5e-24 97 30 4 203 1 rhtC Threonine efflux protein Escherichia coli (strain K12)
P0AG39 3.5e-24 97 30 4 203 3 rhtC Threonine efflux protein Escherichia coli O157:H7
A8AHJ0 1.7e-20 88 31 3 188 3 leuE Leucine efflux protein Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q57320 4.2e-18 82 29 6 198 3 HI_1307 Uncharacterized membrane protein HI_1307 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q1RAZ2 5.1e-18 81 29 4 189 3 leuE Leucine efflux protein Escherichia coli (strain UTI89 / UPEC)
Q8FGV4 5.1e-18 81 29 4 189 3 leuE Leucine efflux protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TH31 5.1e-18 81 29 4 189 3 leuE Leucine efflux protein Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1ABX2 5.1e-18 81 29 4 189 3 leuE Leucine efflux protein Escherichia coli O1:K1 / APEC
Q8XDS6 1.19e-17 80 29 4 188 3 leuE Leucine efflux protein Escherichia coli O157:H7
Q32FT6 1.28e-17 80 29 4 188 3 leuE Leucine efflux protein Shigella dysenteriae serotype 1 (strain Sd197)
A6T7N0 1.38e-17 80 28 4 193 3 leuE Leucine efflux protein Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
P76249 1.53e-17 80 29 4 188 1 leuE Leucine efflux protein Escherichia coli (strain K12)
A8A0Z3 1.53e-17 80 29 4 188 3 leuE Leucine efflux protein Escherichia coli O9:H4 (strain HS)
Q3Z2D8 1.66e-17 80 29 4 188 3 leuE Leucine efflux protein Shigella sonnei (strain Ss046)
A7ZMR9 1.66e-17 80 29 4 188 3 leuE Leucine efflux protein Escherichia coli O139:H28 (strain E24377A / ETEC)
Q321T8 1.06e-16 77 28 3 188 5 leuE Putative leucine efflux protein Shigella boydii serotype 4 (strain Sb227)
Q7CQP8 9.07e-16 75 28 5 194 3 leuE Leucine efflux protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8XEV9 9.07e-16 75 28 5 194 3 leuE Leucine efflux protein Salmonella typhi
Q5PHF4 9.07e-16 75 28 5 194 3 leuE Leucine efflux protein Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57Q25 9.07e-16 75 28 5 194 3 leuE Leucine efflux protein Salmonella choleraesuis (strain SC-B67)
P38102 1.65e-15 75 28 3 189 3 PA4757 Uncharacterized membrane protein PA4757 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P75693 2.98e-15 74 29 6 188 3 yahN Uncharacterized membrane protein YahN Escherichia coli (strain K12)
A4WB82 2.42e-13 69 32 2 130 3 leuE Leucine efflux protein Enterobacter sp. (strain 638)
Q9KVK7 6.46e-13 67 25 4 195 3 VC_0136 Uncharacterized membrane protein VC_0136 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0AG37 1.08e-10 62 32 2 121 3 rhtB Homoserine/homoserine lactone efflux protein Shigella flexneri
P0AG34 1.08e-10 62 32 2 121 1 rhtB Homoserine/homoserine lactone efflux protein Escherichia coli (strain K12)
P0AG35 1.08e-10 62 32 2 121 3 rhtB Homoserine/homoserine lactone efflux protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AG36 1.08e-10 62 32 2 121 3 rhtB Homoserine/homoserine lactone efflux protein Escherichia coli O157:H7
Q9L6N6 1.6e-09 58 32 2 119 3 rhtB Homoserine/homoserine lactone efflux protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z3B4 1.9e-09 58 37 3 107 3 rhtB Homoserine/homoserine lactone efflux protein Salmonella typhi
P74343 1.65e-05 47 29 1 106 3 slr1627 Uncharacterized membrane protein slr1627 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P94381 4.05e-05 46 29 3 117 3 ycgF Putative amino acid efflux protein YcgF Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15635
Feature type CDS
Gene -
Product LysE family transporter
Location 124172 - 124786 (strand: -1)
Length 615 (nucleotides) / 204 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2702
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01810 LysE type translocator

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1280 Amino acid transport and metabolism (E) E Threonine/homoserine/homoserine lactone efflux protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05835 threonine efflux protein - -

Protein Sequence

MYDATLMVTTVAALGMISPGPDFFLIVKNAARYQRAAAMMTALGLLAAIAIHMTYCVAGLAVIITTTPWLFTILKYAGAAYLIWIGINSLLSRAGHAPDTEENSHQRVSFKKAFMQGFLCNLLNPKATLFFLAIFTQVLDVNSGFGEKLWYAAIVMGLAVIYWPSLVLLIQSAPVRRGLARIQKYIDKVLGVVLIGFGVRVAMS

Flanking regions ( +/- flanking 50bp)

AGTCATACTTTTACTCTGTGTACAGGTCTTTTTCAGCAAGGATATCCCACATGTATGATGCCACCCTGATGGTGACCACTGTCGCCGCGCTCGGAATGATCTCCCCGGGTCCTGATTTTTTCCTGATAGTGAAGAATGCCGCCCGCTATCAGCGGGCCGCCGCAATGATGACCGCGCTGGGCTTACTCGCCGCAATCGCTATTCACATGACCTACTGTGTGGCAGGGCTGGCCGTGATCATCACCACTACACCGTGGCTTTTTACTATCCTCAAATATGCCGGTGCAGCCTATCTTATCTGGATAGGTATCAACAGCTTACTTTCACGTGCAGGGCATGCTCCTGACACAGAAGAGAATTCACATCAGCGTGTTTCCTTTAAAAAAGCCTTTATGCAGGGATTTCTCTGTAATCTTCTTAATCCGAAAGCGACACTTTTCTTCCTGGCAATTTTTACACAGGTACTGGATGTCAATTCAGGTTTTGGTGAAAAACTCTGGTATGCTGCTATTGTAATGGGTCTGGCGGTGATTTACTGGCCCTCACTGGTACTGCTTATCCAGAGTGCGCCGGTACGCCGGGGACTGGCAAGAATTCAGAAATATATTGATAAAGTACTTGGCGTCGTCCTGATTGGTTTCGGTGTCCGGGTTGCCATGAGCTGATAATAATGACAATAAATAAGAAACATACTTTCCAGCCTGAATTTCAGGCT