Homologs in group_3070

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_16975 EHELCC_16975 100.0 Morganella morganii S2 rhtB Threonine/homoserine/homoserine lactone efflux protein
NLDBIP_18355 NLDBIP_18355 100.0 Morganella morganii S4 rhtB Threonine/homoserine/homoserine lactone efflux protein
LHKJJB_09270 LHKJJB_09270 100.0 Morganella morganii S3 rhtB Threonine/homoserine/homoserine lactone efflux protein
HKOGLL_08820 HKOGLL_08820 100.0 Morganella morganii S5 rhtB Threonine/homoserine/homoserine lactone efflux protein
F4V73_RS13815 F4V73_RS13815 88.0 Morganella psychrotolerans - LysE family transporter

Distribution of the homologs in the orthogroup group_3070

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3070

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9L6N7 6.84e-24 97 30 4 210 3 rhtC Threonine efflux protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z3B3 2.46e-23 95 30 4 210 3 rhtC Threonine efflux protein Salmonella typhi
P0AG38 4.08e-21 90 28 3 210 1 rhtC Threonine efflux protein Escherichia coli (strain K12)
P0AG39 4.08e-21 90 28 3 210 3 rhtC Threonine efflux protein Escherichia coli O157:H7
P75693 5.03e-17 79 26 4 200 3 yahN Uncharacterized membrane protein YahN Escherichia coli (strain K12)
Q57320 1.42e-12 67 24 5 209 3 HI_1307 Uncharacterized membrane protein HI_1307 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O05406 1.21e-11 64 28 0 125 3 yrhP Uncharacterized membrane protein YrhP Bacillus subtilis (strain 168)
P76249 7.01e-09 57 24 6 198 1 leuE Leucine efflux protein Escherichia coli (strain K12)
A8A0Z3 7.01e-09 57 24 6 198 3 leuE Leucine efflux protein Escherichia coli O9:H4 (strain HS)
Q1RAZ2 1.96e-08 55 23 6 198 3 leuE Leucine efflux protein Escherichia coli (strain UTI89 / UPEC)
Q8FGV4 1.96e-08 55 23 6 198 3 leuE Leucine efflux protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TH31 1.96e-08 55 23 6 198 3 leuE Leucine efflux protein Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1ABX2 1.96e-08 55 23 6 198 3 leuE Leucine efflux protein Escherichia coli O1:K1 / APEC
Q32FT6 2.76e-08 55 23 6 198 3 leuE Leucine efflux protein Shigella dysenteriae serotype 1 (strain Sd197)
Q3Z2D8 7.81e-08 54 23 6 198 3 leuE Leucine efflux protein Shigella sonnei (strain Ss046)
A7ZMR9 7.81e-08 54 23 6 198 3 leuE Leucine efflux protein Escherichia coli O139:H28 (strain E24377A / ETEC)
Q8XDS6 9.88e-08 53 23 6 198 3 leuE Leucine efflux protein Escherichia coli O157:H7
A4WB82 1.45e-07 53 30 7 146 3 leuE Leucine efflux protein Enterobacter sp. (strain 638)
Q321T8 1.58e-07 53 22 5 190 5 leuE Putative leucine efflux protein Shigella boydii serotype 4 (strain Sb227)
P38102 1.24e-06 50 26 1 123 3 PA4757 Uncharacterized membrane protein PA4757 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A6T7N0 3.81e-06 49 25 3 131 3 leuE Leucine efflux protein Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
P0AG37 4.39e-06 49 26 4 150 3 rhtB Homoserine/homoserine lactone efflux protein Shigella flexneri
P0AG34 4.39e-06 49 26 4 150 1 rhtB Homoserine/homoserine lactone efflux protein Escherichia coli (strain K12)
P0AG35 4.39e-06 49 26 4 150 3 rhtB Homoserine/homoserine lactone efflux protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AG36 4.39e-06 49 26 4 150 3 rhtB Homoserine/homoserine lactone efflux protein Escherichia coli O157:H7
A8AHJ0 7.34e-06 48 26 3 131 3 leuE Leucine efflux protein Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q7CQP8 9.25e-06 48 25 3 131 3 leuE Leucine efflux protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8XEV9 9.25e-06 48 25 3 131 3 leuE Leucine efflux protein Salmonella typhi
Q5PHF4 9.25e-06 48 25 3 131 3 leuE Leucine efflux protein Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57Q25 9.25e-06 48 25 3 131 3 leuE Leucine efflux protein Salmonella choleraesuis (strain SC-B67)
Q9KVK7 0.000108 45 26 2 125 3 VC_0136 Uncharacterized membrane protein VC_0136 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_18780
Feature type CDS
Gene rhtB
Product Threonine/homoserine/homoserine lactone efflux protein
Location 1669 - 2319 (strand: -1)
Length 651 (nucleotides) / 216 (amino acids)

Contig

Accession contig_36
Length 27638 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3070
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01810 LysE type translocator

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1280 Amino acid transport and metabolism (E) E Threonine/homoserine/homoserine lactone efflux protein

Protein Sequence

MMIFFAVALAHFIALISPGPDFLLIIKSTLRNSRRVAFGVVSGIATANALYIVLCLAGAGAILAQSVTLMILIKLFGGIFLLFIAWQALRAKKSDYRFLIAQAAEDRNTHPQSTFKKEFLVGLSSGLLNPKNLLFYLSLFTVVLESQDNSVLFKTGIALWMVMAVLIWDSLIMYLLTRPAVRQQFNRCAFWIDKTAGIILGLVGLKIIHMTFKSTP

Flanking regions ( +/- flanking 50bp)

TTCAGTGATATGTTTTTTTTATTACTTCATTTCTGTGCCGGATAATCATCATGATGATTTTTTTTGCTGTGGCGCTCGCTCACTTTATCGCTCTGATAAGCCCCGGGCCTGATTTTCTGCTGATTATAAAAAGTACCCTGCGTAACAGCAGACGGGTGGCATTTGGTGTTGTCTCCGGTATTGCCACTGCCAATGCACTGTATATTGTACTCTGCCTGGCCGGTGCAGGCGCTATCCTCGCACAATCTGTCACGCTGATGATTCTGATTAAATTGTTCGGCGGAATATTCCTGCTCTTTATCGCATGGCAGGCATTACGGGCAAAAAAATCTGATTACCGTTTTCTGATAGCACAGGCAGCTGAAGACAGAAATACACATCCGCAGAGTACGTTTAAAAAAGAATTTCTGGTCGGCTTATCCTCCGGCCTGTTAAATCCCAAGAATTTATTATTCTATTTAAGTCTGTTTACTGTTGTGCTGGAAAGTCAGGATAATTCCGTACTATTTAAAACCGGTATTGCACTCTGGATGGTGATGGCCGTATTAATCTGGGACAGCCTGATTATGTATCTTCTGACCCGGCCCGCAGTACGTCAGCAATTTAATCGCTGTGCCTTCTGGATTGATAAAACCGCCGGTATTATTCTCGGTCTGGTCGGACTGAAAATTATTCATATGACATTTAAAAGCACGCCTTAACTTAATCAGGATATTACCGTGACTGCTGTTTTACGACATTGTTTTACCGC