Homologs in group_3206

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02595 FBDBKF_02595 100.0 Morganella morganii S1 - L-lysine permease
EHELCC_03065 EHELCC_03065 100.0 Morganella morganii S2 - L-lysine permease
LHKJJB_01640 LHKJJB_01640 100.0 Morganella morganii S3 - L-lysine permease
HKOGLL_01680 HKOGLL_01680 100.0 Morganella morganii S5 - L-lysine permease

Distribution of the homologs in the orthogroup group_3206

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3206

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75693 1.71e-23 90 67 0 62 3 yahN Uncharacterized membrane protein YahN Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_00395
Feature type CDS
Gene -
Product L-lysine permease
Location 76042 - 76239 (strand: 1)
Length 198 (nucleotides) / 65 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3206
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01810 LysE type translocator

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1280 Amino acid transport and metabolism (E) E Threonine/homoserine/homoserine lactone efflux protein

Protein Sequence

MDPLHSIAVTLFLFVLTFFNPGANLFIVAQTTLSSGQKAGLTCGYGVVLGNAIYSGLGLFGLVKV

Flanking regions ( +/- flanking 50bp)

CCGCGATTTTTCGTTAAGCTGAATTAAGCTTTTCCGGGGAGAACCCCGTTATGGATCCGCTGCACAGCATTGCCGTCACGCTTTTTTTGTTTGTCCTGACTTTTTTCAATCCCGGGGCAAATCTGTTTATTGTTGCGCAGACCACACTGAGTTCCGGACAAAAAGCGGGGCTGACCTGCGGTTACGGCGTGGTGCTGGGCAATGCGATTTACTCGGGGCTGGGATTATTCGGGCTGGTGAAGGTGTAGGTCAGCCCCGCACGGTGGCTGTAAGCTGAGGTATCACTGTTTTGTGTTGT