Orthogroup:group_3071


Homologs in group_3071

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18795 FBDBKF_18795 Morganella morganii S1 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
EHELCC_16990 EHELCC_16990 Morganella morganii S2 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
NLDBIP_18370 NLDBIP_18370 Morganella morganii S4 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
LHKJJB_09255 LHKJJB_09255 Morganella morganii S3 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
HKOGLL_08805 HKOGLL_08805 Morganella morganii S5 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
F4V73_RS13800 F4V73_RS13800 Morganella psychrotolerans - fumarate hydratase

Distribution of group_3071 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3071 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3071

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3071.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ttdA 5
2 - 1

Product

# Product Occurence
1 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 5
2 fumarate hydratase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1951 6 C Energy production and conversion (C) Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05681 6 Fumarate hydratase (Fumerase)
PF05683 6 Fumarase C-terminus

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
Fumarate hydratase 1, mitochondrial 1
Fumarate hydratase 2 1
Fumarate hydratase class I, aerobic 4
Fumarate hydratase class I, anaerobic 1
L(+)-tartrate dehydratase subunit beta 8
Putative L(+)-tartrate dehydratase subunit alpha 1
Putative L(+)-tartrate dehydratase subunit beta 1
Putative fumarate hydratase class I 1

Protein length

Unique protein length 552

Protein length distribution