Carbon fixation pathways in prokaryotes
Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella morganii S3 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Carbon fixation pathways in prokaryotes Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Carbon fixation pathways in prokaryotes pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K00024 | malate dehydrogenase [EC:1.1.1.37] | 0 | 0 |
| K00031 | isocitrate dehydrogenase [EC:1.1.1.42] | 1 | 7 |
| K00169 | pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] | 0 | 0 |
| K00170 | pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] | 0 | 0 |
| K00171 | pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] | 0 | 0 |
| K00172 | pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] | 0 | 0 |
| K00174 | 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] | 0 | 0 |
| K00175 | 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] | 0 | 0 |
| K00176 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] | 0 | 0 |
| K00177 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] | 0 | 0 |
| K00189 | 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] | 0 | 0 |
| K00194 | acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] | 0 | 0 |
| K00196 | anaerobic carbon-monoxide dehydrogenase iron sulfur subunit | 0 | 0 |
| K00197 | acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] | 0 | 0 |
| K00198 | anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] | 0 | 0 |
| K00233 | succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] | 0 | 0 |
| K00239 | succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] | 2 | 14 |
| K00240 | succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] | 1 | 7 |
| K00241 | succinate dehydrogenase cytochrome b subunit | 1 | 7 |
| K00242 | succinate dehydrogenase membrane anchor subunit | 1 | 7 |
| K00244 | succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] | 0 | 0 |
| K00245 | succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] | 1 | 7 |
| K00246 | succinate dehydrogenase subunit C | 1 | 7 |
| K00247 | succinate dehydrogenase subunit D | 1 | 7 |
| K00297 | methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] | 1 | 7 |
| K00625 | phosphate acetyltransferase [EC:2.3.1.8] | 0 | 0 |
| K00626 | acetyl-CoA C-acetyltransferase [EC:2.3.1.9] | 2 | 13 |
| K00925 | acetate kinase [EC:2.7.2.1] | 1 | 7 |
| K01006 | pyruvate, orthophosphate dikinase [EC:2.7.9.1] | 0 | 0 |
| K01007 | pyruvate, water dikinase [EC:2.7.9.2] | 1 | 7 |
| K01491 | methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] | 1 | 7 |
| K01500 | methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] | 0 | 0 |
| K01595 | phosphoenolpyruvate carboxylase [EC:4.1.1.31] | 1 | 7 |
| K01648 | ATP citrate (pro-S)-lyase [EC:2.3.3.8] | 0 | 0 |
| K01675 | fumarate hydratase D [EC:4.2.1.2] | 0 | 0 |
| K01676 | fumarate hydratase, class I [EC:4.2.1.2] | 1 | 6 |
| K01677 | fumarate hydratase subunit alpha [EC:4.2.1.2] | 0 | 0 |
| K01678 | fumarate hydratase subunit beta [EC:4.2.1.2] | 0 | 0 |
| K01679 | fumarate hydratase, class II [EC:4.2.1.2] | 1 | 7 |
| K01681 | aconitate hydratase [EC:4.2.1.3] | 1 | 7 |
| K01682 | aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] | 1 | 7 |
| K01774 | fumarate hydratase E [EC:4.2.1.2] | 0 | 0 |
| K01847 | methylmalonyl-CoA mutase [EC:5.4.99.2] | 0 | 0 |
| K01848 | methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] | 0 | 0 |
| K01849 | methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] | 0 | 0 |
| K01895 | acetyl-CoA synthetase [EC:6.2.1.1] | 1 | 7 |
| K01902 | succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] | 1 | 7 |
| K01903 | succinyl-CoA synthetase beta subunit [EC:6.2.1.5] | 1 | 7 |
| K01938 | formate--tetrahydrofolate ligase [EC:6.3.4.3] | 0 | 1 |
| K01958 | pyruvate carboxylase [EC:6.4.1.1] | 0 | 0 |
| K01959 | pyruvate carboxylase subunit A [EC:6.4.1.1] | 0 | 0 |
| K01960 | pyruvate carboxylase subunit B [EC:6.4.1.1] | 0 | 0 |
| K01961 | acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] | 1 | 7 |
| K01962 | acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] | 2 | 14 |
| K01963 | acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] | 1 | 7 |
| K01964 | acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3] | 0 | 0 |
| K02160 | acetyl-CoA carboxylase biotin carboxyl carrier protein | 1 | 7 |
| K03737 | pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] | 1 | 5 |
| K05299 | formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] | 0 | 0 |
| K05606 | methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] | 0 | 0 |
| K08691 | malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] | 0 | 0 |
| K09709 | 3-methylfumaryl-CoA hydratase [EC:4.2.1.153] | 0 | 0 |
| K13788 | phosphate acetyltransferase [EC:2.3.1.8] | 1 | 7 |
| K14138 | acetyl-CoA synthase [EC:2.3.1.169] | 0 | 0 |
| K14449 | 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] | 0 | 0 |
| K14465 | succinate semialdehyde reductase (NADPH) [EC:1.1.1.-] | 0 | 0 |
| K14466 | 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] | 0 | 0 |
| K14467 | 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] | 0 | 0 |
| K14468 | malonyl-CoA reductase / 3-hydroxypropionate dehydrogenase (NADP+) [EC:1.2.1.75 1.1.1.298] | 0 | 0 |
| K14469 | acrylyl-CoA reductase (NADPH) / 3-hydroxypropionyl-CoA dehydratase / 3-hydroxypropionyl-CoA synthetase [EC:1.3.1.84 4.2.1.116 6.2.1.36] | 0 | 0 |
| K14470 | 2-methylfumaryl-CoA isomerase [EC:5.4.1.3] | 0 | 0 |
| K14471 | succinyl-CoA:(S)-malate CoA-transferase subunit A [EC:2.8.3.22] | 0 | 0 |
| K14472 | succinyl-CoA:(S)-malate CoA-transferase subunit B [EC:2.8.3.22] | 0 | 0 |
| K14534 | 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] | 0 | 0 |
| K15016 | enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35] | 0 | 0 |
| K15017 | malonyl-CoA/succinyl-CoA reductase (NADPH) [EC:1.2.1.75 1.2.1.76] | 0 | 0 |
| K15018 | 3-hydroxypropionyl-coenzyme A synthetase [EC:6.2.1.36] | 0 | 0 |
| K15019 | 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116] | 0 | 0 |
| K15020 | acryloyl-coenzyme A reductase [EC:1.3.1.84] | 0 | 0 |
| K15022 | formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10] | 0 | 0 |
| K15023 | 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] | 0 | 0 |
| K15024 | putative phosphotransacetylase [EC:2.3.1.8] | 0 | 1 |
| K15036 | acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] | 0 | 0 |
| K15037 | biotin carboxyl carrier protein | 0 | 0 |
| K15038 | succinyl-CoA reductase [EC:1.2.1.76] | 0 | 0 |
| K15039 | 3-hydroxypropionate dehydrogenase (NADP+) [EC:1.1.1.298] | 0 | 0 |
| K15052 | propionyl-CoA carboxylase [EC:6.4.1.3 2.1.3.15] | 0 | 0 |
| K15230 | ATP-citrate lyase alpha-subunit [EC:2.3.3.8] | 0 | 0 |
| K15231 | ATP-citrate lyase beta-subunit [EC:2.3.3.8] | 0 | 0 |
| K15232 | citryl-CoA synthetase large subunit [EC:6.2.1.18] | 0 | 0 |
| K15233 | citryl-CoA synthetase small subunit | 0 | 0 |
| K15234 | citryl-CoA lyase [EC:4.1.3.34] | 0 | 0 |
| K18209 | fumarate reductase (CoM/CoB) subunit A [EC:1.3.4.1] | 0 | 0 |
| K18210 | fumarate reductase (CoM/CoB) subunit B [EC:1.3.4.1] | 0 | 0 |
| K18556 | NADH-dependent fumarate reductase subunit A [EC:1.3.1.6] | 0 | 0 |
| K18557 | NADH-dependent fumarate reductase subunit B [EC:1.3.1.6] | 0 | 0 |
| K18558 | NADH-dependent fumarate reductase subunit C | 0 | 0 |
| K18559 | NADH-dependent fumarate reductase subunit D | 0 | 0 |
| K18560 | NADH-dependent fumarate reductase subunit E | 0 | 0 |
| K18593 | 4-hydroxybutyrate---CoA ligase (ADP-forming) [EC:6.2.1.56] | 0 | 0 |
| K18594 | 3-hydroxypropionyl-CoA synthetase (ADP-forming) [EC:6.2.1.-] | 0 | 0 |
| K18602 | malonic semialdehyde reductase [EC:1.1.1.-] | 0 | 0 |
| K18603 | acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3] | 0 | 0 |
| K18604 | acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] | 0 | 0 |
| K18605 | biotin carboxyl carrier protein | 0 | 0 |
| K18859 | succinate dehydrogenase subunit D | 0 | 0 |
| K18860 | succinate dehydrogenase subunit D | 0 | 0 |
| K18861 | 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] | 0 | 0 |
| K22015 | formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] | 2 | 14 |
| K25007 | methylenetetrahydrofolate reductase (NADH) small subunit | 0 | 0 |
| K25008 | ion-translocating oxidoreductase complex subunit C [EC:7.-.-.-] | 0 | 0 |
| K25123 | iron hydrogenase HydA2 [EC:1.12.7.-] | 0 | 0 |
| K25124 | FeS-containing electron transfer protein | 0 | 0 |
| K25221 | [methyl-Co(III) glycine betaine-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.378] | 0 | 0 |
| K25774 | 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] | 0 | 0 |
| K25915 | [methyl-Co(III) methoxylated-aromatic-compound-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.385] | 0 | 0 |
| K25995 | succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] | 0 | 0 |
| K25996 | succinate dehydrogenase subunit C | 0 | 0 |
| K26318 | fumarate reductase (cytochrome) [EC:1.3.2.4] | 0 | 0 |
| K26930 | [methyl-Co(III) quaternary-amine-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.389] | 0 | 0 |