K22015


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K22015, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K22015
KO K22015
Description formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]

KO part of 5 pathways

Methane metabolism
Carbon fixation pathways in prokaryotes
Metabolic pathways
Microbial metabolism in diverse environments
Carbon metabolism

KO part of 1 modules

M00377 Carbon fixation Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)

Occurence in the database

K22015 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_32 PMI_RS14730 3265604 3267772 -1 fdhF formate dehydrogenase subunit alpha Proteus mirabilis HI4320
1 group_32 PMI_RS17800 3909884 3912028 1 fdhF formate dehydrogenase subunit alpha Proteus mirabilis HI4320
2 group_32 FBDBKF_03650 133050 134981 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S1
3 group_32 EHELCC_06885 112122 114053 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S2
4 group_32 NLDBIP_07210 111995 113926 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S4
5 group_32 LHKJJB_06745 75741 77672 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S3
6 group_32 HKOGLL_04185 155715 157646 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S5
7 group_32 FBDBKF_07405 163964 166132 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S1
8 group_32 EHELCC_03565 20054 22222 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S2
9 group_32 NLDBIP_03565 19850 22018 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S4
10 group_32 LHKJJB_09395 19964 22132 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S3
11 group_32 HKOGLL_09580 168920 171088 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S5
12 group_32 F4V73_RS08500 1754658 1756823 -1 fdhF formate dehydrogenase subunit alpha Morganella psychrotolerans
13 group_32 F4V73_RS11220 383637 385790 1 fdhF formate dehydrogenase subunit alpha Morganella psychrotolerans