PF01497

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF01497
Protein list: lists the 94 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF01497
Description Periplasmic binding protein

Occurence in the database

PF01497 is associated with 94 different proteins
The 94 proteins are classified into 12 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2556 FBDBKF_02300 146869 147951 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
1 group_2576 FBDBKF_02530 204361 205272 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
2 group_3210 FBDBKF_02715 239418 240410 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
3 group_2604 FBDBKF_02840 262694 263662 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
4 group_5 FBDBKF_03290 57346 58443 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
5 group_5 FBDBKF_04575 112290 113447 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
6 group_2775 FBDBKF_07645 41680 42588 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
7 group_1504 FBDBKF_09210 72259 73290 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
8 group_1830 FBDBKF_13305 39675 40505 1 chuT ABC-type hemin transport system, periplasmic component Morganella morganii S1
9 group_1914 FBDBKF_14010 99988 100794 1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF Morganella morganii S1
10 group_5 FBDBKF_14810 62474 63598 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
11 group_355 FBDBKF_15020 15043 15999 1 ceuA ABC-type enterochelin transport system, periplasmic component Morganella morganii S1
12 group_2959 FBDBKF_15105 30073 31170 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
13 group_5 FBDBKF_18095 21020 22120 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
14 group_3630 FBDBKF_20500 1106 2149 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S1
15 group_2556 EHELCC_02770 534689 535771 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
16 group_2576 EHELCC_03000 592181 593092 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
17 group_3210 EHELCC_03185 627238 628230 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
18 group_2604 EHELCC_03310 650514 651482 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
19 group_5 EHELCC_05865 171747 172904 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
20 group_5 EHELCC_07245 188660 189757 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
21 group_1830 EHELCC_08790 234686 235516 -1 chuT ABC-type hemin transport system, periplasmic component Morganella morganii S2
22 group_1504 EHELCC_10200 72814 73845 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
23 group_2959 EHELCC_11140 53736 54833 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
24 group_355 EHELCC_11225 68907 69863 -1 ceuA ABC-type enterochelin transport system, periplasmic component Morganella morganii S2
25 group_1914 EHELCC_11685 184864 185670 1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF Morganella morganii S2
26 group_2775 EHELCC_13475 15874 16782 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
27 group_5 EHELCC_15615 92550 93674 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
28 group_5 EHELCC_16795 21020 22120 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
29 group_3630 EHELCC_19795 733 1776 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S2
30 group_2604 NLDBIP_00150 28654 29622 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
31 group_3210 NLDBIP_00275 51906 52898 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
32 group_2576 NLDBIP_00460 87044 87955 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
33 group_2556 NLDBIP_00690 144365 145447 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
34 group_5 NLDBIP_06185 212812 213969 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
35 group_5 NLDBIP_07570 188533 189630 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
36 group_1830 NLDBIP_09115 234686 235516 -1 chuT ABC-type hemin transport system, periplasmic component Morganella morganii S4
37 group_1504 NLDBIP_10545 51085 52116 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
38 group_2959 NLDBIP_11485 53736 54833 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
39 group_355 NLDBIP_11570 68907 69863 -1 ceuA ABC-type enterochelin transport system, periplasmic component Morganella morganii S4
40 group_1914 NLDBIP_12025 184864 185670 1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF Morganella morganii S4
41 group_2775 NLDBIP_13920 36749 37657 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
42 group_5 NLDBIP_16145 92550 93674 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
43 group_5 NLDBIP_17655 33646 34746 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
44 group_3630 NLDBIP_19830 1106 2149 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S4
45 group_2556 LHKJJB_01345 247238 248320 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
46 group_2576 LHKJJB_01575 304730 305641 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
47 group_3210 LHKJJB_01760 339787 340779 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
48 group_2604 LHKJJB_01885 363063 364031 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
49 group_5 LHKJJB_03065 190336 191493 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
50 group_1830 LHKJJB_05150 21643 22473 1 chuT ABC-type hemin transport system, periplasmic component Morganella morganii S3
51 group_5 LHKJJB_07105 152279 153376 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
52 group_2775 LHKJJB_08930 122092 123000 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
53 group_1504 LHKJJB_10810 139412 140443 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
54 group_2959 LHKJJB_11345 53736 54833 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
55 group_355 LHKJJB_11430 68907 69863 -1 ceuA ABC-type enterochelin transport system, periplasmic component Morganella morganii S3
56 group_1914 LHKJJB_11885 184864 185670 1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF Morganella morganii S3
57 group_5 LHKJJB_15695 23012 24136 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
58 group_5 LHKJJB_17575 33646 34746 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
59 group_3630 LHKJJB_19795 733 1776 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S3
60 group_2556 HKOGLL_01385 252749 253831 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
61 group_2576 HKOGLL_01615 310241 311152 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
62 group_3210 HKOGLL_01800 345298 346290 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
63 group_2604 HKOGLL_01925 368574 369542 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
64 group_5 HKOGLL_03825 80011 81108 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
65 group_1830 HKOGLL_05765 219277 220107 -1 chuT ABC-type hemin transport system, periplasmic component Morganella morganii S5
66 group_5 HKOGLL_06540 112200 113357 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
67 group_2775 HKOGLL_08480 122092 123000 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
68 group_2959 HKOGLL_09955 53736 54833 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
69 group_355 HKOGLL_10040 68907 69863 -1 ceuA ABC-type enterochelin transport system, periplasmic component Morganella morganii S5
70 group_1914 HKOGLL_10500 184864 185670 1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF Morganella morganii S5
71 group_1504 HKOGLL_13870 72713 73744 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
72 group_5 HKOGLL_14815 22224 23348 1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
73 group_5 HKOGLL_17390 33646 34746 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
74 group_3630 HKOGLL_19670 1106 2149 -1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component Morganella morganii S5
75 group_1830 F4V73_RS03450 734947 735774 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
76 group_5 F4V73_RS04180 883073 884188 1 ABC transporter substrate-binding protein Morganella psychrotolerans
77 group_2556 F4V73_RS04675 984970 986058 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
78 group_2576 F4V73_RS04955 1056335 1057246 1 ABC transporter substrate-binding protein Morganella psychrotolerans
79 group_2604 F4V73_RS05280 1122691 1123644 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
80 group_5 F4V73_RS07610 1591954 1593078 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
81 group_5 F4V73_RS09030 1886954 1888126 1 ABC transporter substrate-binding protein Morganella psychrotolerans
82 group_5 F4V73_RS10300 171794 172894 1 ABC transporter substrate-binding protein Morganella psychrotolerans
83 group_1504 F4V73_RS10760 282967 284001 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
84 group_2959 F4V73_RS12345 54079 55176 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
85 group_355 F4V73_RS12430 69743 70699 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
86 group_1914 F4V73_RS12865 177671 178486 1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF Morganella psychrotolerans
87 group_2775 F4V73_RS13475 328146 329039 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
88 group_1914 PMI_RS01025 252452 253282 -1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF Proteus mirabilis HI4320
89 group_5 PMI_RS01155 284414 285541 1 ABC transporter substrate-binding protein Proteus mirabilis HI4320
90 group_355 PMI_RS01580 381944 382894 1 siderophore ABC transporter substrate-binding protein Proteus mirabilis HI4320
91 group_1830 PMI_RS06910 1512792 1513607 1 hemin ABC transporter substrate-binding protein Proteus mirabilis HI4320
92 group_1504 PMI_RS13180 2926361 2927392 1 iron ABC transporter substrate-binding protein Proteus mirabilis HI4320
93 group_355 PMI_RS14620 3240142 3241101 1 siderophore ABC transporter substrate-binding protein Proteus mirabilis HI4320