Homologs in group_1448

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09210 FBDBKF_09210 54.0 Morganella morganii S1 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
EHELCC_10200 EHELCC_10200 54.0 Morganella morganii S2 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
NLDBIP_10545 NLDBIP_10545 54.0 Morganella morganii S4 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
LHKJJB_10810 LHKJJB_10810 54.0 Morganella morganii S3 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
HKOGLL_13870 HKOGLL_13870 54.0 Morganella morganii S5 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
F4V73_RS10760 F4V73_RS10760 53.0 Morganella psychrotolerans - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1448

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1448

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44206 1.57e-09 62 25 12 322 1 molA Molybdate-binding protein MolA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57550 1.76e-06 52 23 12 280 3 MJ0085 Uncharacterized lipoprotein MJ0085 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
C6DC28 4.21e-05 48 26 9 213 3 btuF Vitamin B12-binding protein Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q57T49 0.00029 45 24 10 227 3 btuF Vitamin B12-binding protein Salmonella choleraesuis (strain SC-B67)
Q8ZRP7 0.000377 45 24 10 227 3 btuF Vitamin B12-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q83MD7 0.000557 44 24 9 220 3 btuF Vitamin B12-binding protein Shigella flexneri
Q5PD47 0.000686 44 24 10 227 3 btuF Vitamin B12-binding protein Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q87SE7 0.000701 44 25 14 260 3 btuF Vitamin B12-binding protein Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A4TPX1 0.001 43 27 13 244 3 btuF Vitamin B12-binding protein Yersinia pestis (strain Pestoides F)
Q1CLU2 0.001 43 27 13 244 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Nepal516)
A9R1E1 0.001 43 27 13 244 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Angola)
Q8ZBM3 0.001 43 27 13 244 3 btuF Vitamin B12-binding protein Yersinia pestis
Q1C3X6 0.001 43 27 13 244 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Antiqua)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13180
Feature type CDS
Gene -
Product iron ABC transporter substrate-binding protein
Location 2926361 - 2927392 (strand: 1)
Length 1032 (nucleotides) / 343 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1448
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01497 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0614 Inorganic ion transport and metabolism (P) P ABC-type Fe3+-hydroxamate transport system, periplasmic component

Protein Sequence

MAIHRRQFLSYLTTLAALSALPRCARAAITSRIAAQFGVLPTPENIHRVISAGPPTDQLLLALVPEKLLGFSSLNLGKSSLFADKLRKLPHLGRLSGRGSTLSLETLMALEPDIIIDSGNVDETYRSLAKRVSAQTDVPYVLIDGSLKDSPTQLRQTGALLGVAEKAETLALIAEQYLSDATLFASTLKIRPRFYLARGAKGLQTGSTGSIHTEAIELLGFENVADIAGFTGLTDVSPEQLLMWNPEVIITQDENAYQQIRQDSIWKNIQAVKNNKVLLFKGLPFGWLDGPPGINRLMGMRRLQSHFDHRIAEQATQDLQNYFACFYHTSLSAEQCQLLMRSS

Flanking regions ( +/- flanking 50bp)

ATTTATGAAATAACGATTATTAATATAAAACAACACTACAGTGTGAACCTATGGCTATCCACAGACGACAATTTCTGAGTTATTTAACGACGCTTGCAGCATTATCAGCACTGCCACGTTGTGCAAGAGCGGCAATCACTTCACGTATCGCTGCTCAATTTGGTGTGCTTCCTACACCAGAAAATATTCATCGCGTTATTAGCGCAGGCCCACCAACCGACCAACTGTTGTTGGCTTTAGTACCAGAAAAATTATTAGGTTTCTCCTCGCTTAATCTAGGAAAAAGTAGCTTATTTGCCGACAAGTTGCGTAAATTGCCCCATTTAGGCCGTCTGTCTGGCCGTGGTAGTACACTCTCCTTAGAAACATTAATGGCGCTAGAGCCAGATATCATTATTGATAGTGGTAATGTTGATGAAACCTATCGTTCATTAGCTAAACGTGTTAGTGCGCAAACAGATGTACCTTATGTGTTAATTGACGGCAGCTTAAAAGACAGCCCAACTCAGTTACGCCAAACGGGGGCTTTATTAGGTGTGGCAGAAAAAGCAGAAACATTAGCACTTATTGCAGAGCAGTATCTTAGTGATGCGACCTTGTTTGCTTCTACTCTAAAAATAAGACCTCGGTTTTACCTTGCACGTGGTGCGAAAGGCCTACAAACTGGCTCAACAGGATCTATTCATACTGAAGCTATTGAACTATTAGGGTTCGAAAATGTCGCTGATATTGCAGGTTTTACTGGCCTTACTGATGTTTCCCCTGAACAACTCCTTATGTGGAACCCTGAAGTTATCATCACACAAGATGAAAATGCCTATCAGCAAATCAGGCAAGACTCTATATGGAAAAATATCCAAGCTGTTAAAAATAATAAAGTGTTATTATTTAAAGGCTTACCATTTGGCTGGTTAGATGGCCCTCCTGGTATCAACCGTTTAATGGGAATGCGTCGCTTACAGAGCCATTTTGACCATCGAATAGCAGAACAAGCCACGCAAGATCTGCAAAATTACTTTGCTTGTTTTTACCATACATCGTTAAGTGCTGAGCAATGCCAGCTGTTGATGAGGTCTTCATGAGCCAATCAGCACGTATCACTCTGTTGTTGCTGTTATTCTCAGTGGCTGTA