Homologs in group_1876

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14010 FBDBKF_14010 100.0 Morganella morganii S1 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
EHELCC_11685 EHELCC_11685 100.0 Morganella morganii S2 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
NLDBIP_12025 NLDBIP_12025 100.0 Morganella morganii S4 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
LHKJJB_11885 LHKJJB_11885 100.0 Morganella morganii S3 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
F4V73_RS12865 F4V73_RS12865 86.9 Morganella psychrotolerans btuF vitamin B12 ABC transporter substrate-binding protein BtuF
PMI_RS01025 PMI_RS01025 52.5 Proteus mirabilis HI4320 btuF vitamin B12 ABC transporter substrate-binding protein BtuF

Distribution of the homologs in the orthogroup group_1876

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1876

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A4TPX1 8.3e-112 326 58 0 259 3 btuF Vitamin B12-binding protein Yersinia pestis (strain Pestoides F)
Q1CLU2 8.3e-112 326 58 0 259 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Nepal516)
A9R1E1 8.3e-112 326 58 0 259 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Angola)
Q8ZBM3 8.3e-112 326 58 0 259 3 btuF Vitamin B12-binding protein Yersinia pestis
Q1C3X6 8.3e-112 326 58 0 259 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Antiqua)
Q66EE7 1.82e-111 325 60 1 255 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K552 1.82e-111 325 60 1 255 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FM05 1.82e-111 325 60 1 255 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B1JK18 5.1e-111 324 58 0 259 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q7N842 1.58e-106 312 57 0 246 3 btuF Vitamin B12-binding protein Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
C6DC28 4.73e-100 296 55 3 261 3 btuF Vitamin B12-binding protein Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D1Z3 4.45e-99 294 54 2 263 3 btuF Vitamin B12-binding protein Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q8X8Z0 5.33e-93 278 50 2 268 3 btuF Vitamin B12-binding protein Escherichia coli O157:H7
Q57T49 6.42e-93 278 50 3 269 3 btuF Vitamin B12-binding protein Salmonella choleraesuis (strain SC-B67)
Q5PD47 9.83e-93 277 50 3 269 3 btuF Vitamin B12-binding protein Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z9B2 1.36e-92 277 50 2 268 3 btuF Vitamin B12-binding protein Salmonella typhi
Q8ZRP7 2.02e-92 276 50 3 269 3 btuF Vitamin B12-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P37028 2.83e-92 276 50 2 268 1 btuF Vitamin B12-binding protein Escherichia coli (strain K12)
Q83MD7 4.68e-92 275 50 2 268 3 btuF Vitamin B12-binding protein Shigella flexneri
Q8CWD2 1.08e-90 272 49 2 268 3 btuF Vitamin B12-binding protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A7MXP0 7.13e-68 214 40 2 260 3 btuF Vitamin B12-binding protein Vibrio campbellii (strain ATCC BAA-1116)
Q6LUR6 1.83e-66 211 40 2 263 3 btuF Vitamin B12-binding protein Photobacterium profundum (strain SS9)
Q87SE7 2.82e-66 210 40 1 258 3 btuF Vitamin B12-binding protein Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
C3LQF3 6.92e-66 209 43 1 243 3 btuF Vitamin B12-binding protein Vibrio cholerae serotype O1 (strain M66-2)
Q9KPI6 6.92e-66 209 43 1 243 3 btuF Vitamin B12-binding protein Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F5P5 6.92e-66 209 43 1 243 1 btuF Vitamin B12-binding protein Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q7MNT2 2.76e-65 207 41 4 251 3 btuF Vitamin B12-binding protein Vibrio vulnificus (strain YJ016)
Q8DEM7 7.57e-65 206 41 4 251 3 btuF Vitamin B12-binding protein Vibrio vulnificus (strain CMCP6)
O34805 4.13e-25 104 28 9 253 3 yvrC Uncharacterized ABC transporter substrate-binding lipoprotein YvrC Bacillus subtilis (strain 168)
Q56991 1.63e-09 60 24 4 224 1 hmuT Hemin-binding periplasmic protein HmuT Yersinia pestis
Q9HQ20 2.26e-09 60 23 10 265 1 btuF Cobalamin-binding protein Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R5G2 2.26e-09 60 23 10 265 3 btuF Cobalamin-binding protein Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_10500
Feature type CDS
Gene btuF
Product vitamin B12 ABC transporter substrate-binding protein BtuF
Location 184864 - 185670 (strand: 1)
Length 807 (nucleotides) / 268 (amino acids)

Contig

Accession ZDB_687
Length 188522 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1876
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01497 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0614 Inorganic ion transport and metabolism (P) P ABC-type Fe3+-hydroxamate transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06858 vitamin B12 transport system substrate-binding protein ABC transporters -

Protein Sequence

MIKSSLRLAGLLLLLAACGAQAAAQRVITLSPSLAEMAYAAGLGENLVGVSANADYPPEAKNIEQVSSWQGLNLERIIALKPDLIMAWRGGNPQRPLSQLEHLGIKVEYFDPRNLDEIADDLDRLAPYSPQPALAEKAAADMRSGIDALKTRYGNKPEKLIFLQFGQNPIFTASGTTLQSEVVTLCRGKNVFADSPVPWPQVNREQVLTRRPDMILISGDDREVENVKRFWSPQLDVPVITINADWFQRGTPRLLKAAEELCEKINNT

Flanking regions ( +/- flanking 50bp)

CAATCATCTCTGATGGTGGCGGAAATCCTCGCCAATATTGATTCACTGAAATGATAAAATCGTCATTGCGCCTCGCCGGACTACTGCTTCTGCTGGCAGCCTGCGGGGCTCAGGCCGCGGCACAGCGGGTGATCACACTCTCCCCGTCACTGGCGGAGATGGCGTATGCCGCCGGTCTGGGGGAGAACCTGGTCGGTGTCAGCGCCAATGCGGATTACCCGCCGGAAGCGAAAAACATCGAGCAGGTGTCCAGTTGGCAGGGACTGAACCTTGAGCGCATTATTGCCCTGAAACCGGATCTGATCATGGCCTGGCGCGGCGGCAACCCGCAGCGCCCGCTGAGCCAGCTGGAGCATCTCGGGATCAAAGTCGAGTATTTCGATCCGCGCAATCTTGATGAAATTGCGGATGATCTGGATCGCCTCGCGCCTTACAGCCCGCAACCGGCACTGGCGGAAAAAGCGGCTGCCGATATGCGCAGCGGGATTGACGCCCTGAAAACCCGCTACGGCAATAAACCGGAGAAACTGATTTTTCTCCAGTTCGGTCAGAACCCGATTTTCACCGCGTCCGGCACAACCCTGCAAAGTGAAGTGGTGACCCTGTGCCGGGGTAAAAACGTGTTTGCCGACAGCCCGGTACCCTGGCCGCAGGTCAACCGCGAGCAGGTACTGACCCGCAGACCGGACATGATCCTTATCTCCGGAGATGACCGCGAAGTGGAAAATGTAAAGCGCTTCTGGTCTCCGCAGCTTGATGTGCCGGTGATTACGATTAATGCCGACTGGTTCCAGCGCGGCACGCCCCGGCTGTTAAAAGCTGCGGAAGAATTATGTGAGAAAATAAATAACACCTGATATGAATATATCATGTTAATAATATGCCGCTTATTATGCGGCATATTCTT