Orthogroup:group_5


Homologs in group_5

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22 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05895 FBDBKF_05895 Morganella morganii S1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
FBDBKF_09265 FBDBKF_09265 Morganella morganii S1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
FBDBKF_19935 FBDBKF_19935 Morganella morganii S1 nlpA lipoprotein NlpA
EHELCC_07680 EHELCC_07680 Morganella morganii S2 nlpA lipoprotein NlpA
EHELCC_08940 EHELCC_08940 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
EHELCC_10145 EHELCC_10145 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_08005 NLDBIP_08005 Morganella morganii S4 nlpA lipoprotein NlpA
NLDBIP_09320 NLDBIP_09320 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_10490 NLDBIP_10490 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_06260 LHKJJB_06260 Morganella morganii S3 nlpA lipoprotein NlpA
LHKJJB_08435 LHKJJB_08435 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_10865 LHKJJB_10865 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_07985 HKOGLL_07985 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_13925 HKOGLL_13925 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_19115 HKOGLL_19115 Morganella morganii S5 nlpA lipoprotein NlpA
F4V73_RS02430 F4V73_RS02430 Morganella psychrotolerans nlpA lipoprotein NlpA
F4V73_RS10700 F4V73_RS10700 Morganella psychrotolerans - MetQ/NlpA family lipoprotein
F4V73_RS16000 F4V73_RS16000 Morganella psychrotolerans - MetQ/NlpA family lipoprotein
PMI_RS06020 PMI_RS06020 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS06360 PMI_RS06360 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS11165 PMI_RS11165 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS14940 PMI_RS14940 Proteus mirabilis HI4320 - MetQ/NlpA family ABC transporter substrate-binding protein

Distribution of group_5 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_5 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_5

Orthogroup content: 22 members

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This page summarizes the annotation of all members of the orthologous group group_5.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metQ 10
2 nlpA 6
3 - 6

Product

# Product Occurence
1 ABC-type metal ion transport system, periplasmic component/surface antigen 10
2 lipoprotein NlpA 6
3 MetQ/NlpA family lipoprotein 5
4 MetQ/NlpA family ABC transporter substrate-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1464 22 P Inorganic ion transport and metabolism (P) ABC-type metal ion transport system, periplasmic component/surface antigen

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02073 22 D-methionine transport system substrate-binding protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03180 22 NlpA lipoprotein

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG045346 7 immunogenic lipoprotein A VF0513 Adherence

Annotations of the 16 SwissProt hits

Annotation Number of occurrences
D-methionine-binding lipoprotein MetQ 5
Lipoprotein 28 2
Membrane lipoprotein TpN32 1
Methionine-binding lipoprotein MetQ 1
Outer membrane lipoprotein 1 1
Outer membrane lipoprotein 2 1
Outer membrane lipoprotein 3 1
Probable D-methionine-binding lipoprotein MetQ 3
Uncharacterized lipoprotein YhcJ 1

Protein length

Min length 266
Max length 271
Mean length (sd) 269.5 (2.0)
Median length 271.0

Protein length distribution