Orthogroup:group_1830


Homologs in group_1830

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13555 FBDBKF_13555 Morganella morganii S1 tmcA tRNA(Met) C34 N-acetyltransferase TmcA
EHELCC_08540 EHELCC_08540 Morganella morganii S2 tmcA tRNA(Met) C34 N-acetyltransferase TmcA
NLDBIP_08865 NLDBIP_08865 Morganella morganii S4 tmcA tRNA(Met) C34 N-acetyltransferase TmcA
LHKJJB_05400 LHKJJB_05400 Morganella morganii S3 tmcA tRNA(Met) C34 N-acetyltransferase TmcA
HKOGLL_05515 HKOGLL_05515 Morganella morganii S5 tmcA tRNA(Met) C34 N-acetyltransferase TmcA
F4V73_RS03210 F4V73_RS03210 Morganella psychrotolerans - GNAT family N-acetyltransferase
PMI_RS07595 PMI_RS07595 Proteus mirabilis HI4320 - GNAT family N-acetyltransferase

Distribution of group_1830 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1830 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1830

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1830.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tmcA 5
2 - 2

Product

# Product Occurence
1 tRNA(Met) C34 N-acetyltransferase TmcA 5
2 GNAT family N-acetyltransferase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1444 7 J Translation, ribosomal structure and biogenesis (J) tRNA(Met) C34 N-acetyltransferase TmcA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06957 7 tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05127 7 Helicase
PF08351 6 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal
PF13718 7 GNAT acetyltransferase 2
PF17176 7 tRNA-binding domain

Annotations of the 31 SwissProt hits

Annotation Number of occurrences
RNA cytidine acetyltransferase 7
RNA cytidine acetyltransferase (Fragment) 1
RNA cytidine acetyltransferase 1 1
RNA cytidine acetyltransferase 2 1
tRNA(Met) cytidine acetyltransferase TmcA 21

Protein length

Min length 668
Max length 683
Mean length (sd) 670.6 (5.6)
Median length 668.0

Protein length distribution