Orthogroup:group_1504


Homologs in group_1504

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09730 FBDBKF_09730 Morganella morganii S1 cpoB cell division protein CpoB
EHELCC_04530 EHELCC_04530 Morganella morganii S2 cpoB cell division protein CpoB
NLDBIP_04530 NLDBIP_04530 Morganella morganii S4 cpoB cell division protein CpoB
LHKJJB_14100 LHKJJB_14100 Morganella morganii S3 cpoB cell division protein CpoB
HKOGLL_12435 HKOGLL_12435 Morganella morganii S5 cpoB cell division protein CpoB
F4V73_RS00610 F4V73_RS00610 Morganella psychrotolerans cpoB cell division protein CpoB
PMI_RS02880 PMI_RS02880 Proteus mirabilis HI4320 cpoB cell division protein CpoB

Distribution of group_1504 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1504 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1504

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1504.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cpoB 7

Product

# Product Occurence
1 cell division protein CpoB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1729 7 D Cell cycle control, cell division, chromosome partitioning (D) Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13174 7 Tetratricopeptide repeat
PF13432 6 Tetratricopeptide repeat
PF16331 7 TolA binding protein trimerisation

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Cell division coordinator CpoB 3
RNA polymerase-associated protein CTR9 homolog 4

Protein length

Min length 257
Max length 264
Mean length (sd) 259.4 (2.1)
Median length 259.0

Protein length distribution