COG1846


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1846, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 35 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description DNA-binding transcriptional regulator, MarR family
Function(s) descr. Transcription (K)

Occurence in the database

COG1846 is associated with 35 different proteins (see tab "Protein list" and "Profile")
The 35 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_758 FBDBKF_03390 79014 79451 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S1
1 group_1018 FBDBKF_05685 144294 144728 -1 slyA transcriptional regulator SlyA Morganella morganii S1
2 group_1571 FBDBKF_10180 128434 128949 1 mprA transcriptional repressor MprA Morganella morganii S1
3 group_1673 FBDBKF_11630 121861 122283 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S1
4 group_1847 FBDBKF_13815 56602 57033 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S1
5 group_1571 EHELCC_04980 320399 320914 1 mprA transcriptional repressor MprA Morganella morganii S2
6 group_758 EHELCC_07145 167652 168089 1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S2
7 group_1847 EHELCC_11485 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S2
8 group_1018 EHELCC_11905 36766 37200 1 slyA transcriptional regulator SlyA Morganella morganii S2
9 group_1673 EHELCC_17550 20204 20626 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S2
10 group_1571 NLDBIP_04980 320195 320710 1 mprA transcriptional repressor MprA Morganella morganii S4
11 group_758 NLDBIP_07470 167525 167962 1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S4
12 group_1847 NLDBIP_11830 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S4
13 group_1018 NLDBIP_12245 36721 37155 1 slyA transcriptional regulator SlyA Morganella morganii S4
14 group_1673 NLDBIP_18760 20951 21373 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S4
15 group_758 LHKJJB_07005 131271 131708 1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S3
16 group_1847 LHKJJB_11690 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S3
17 group_1018 LHKJJB_12105 36766 37200 1 slyA transcriptional regulator SlyA Morganella morganii S3
18 group_1571 LHKJJB_13650 14668 15183 -1 mprA transcriptional repressor MprA Morganella morganii S3
19 group_1673 LHKJJB_17990 20204 20626 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S3
20 group_758 HKOGLL_03925 101679 102116 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S5
21 group_1847 HKOGLL_10300 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S5
22 group_1018 HKOGLL_10720 36766 37200 1 slyA transcriptional regulator SlyA Morganella morganii S5
23 group_1571 HKOGLL_12885 129215 129730 1 mprA transcriptional repressor MprA Morganella morganii S5
24 group_1673 HKOGLL_18660 3605 4027 1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S5
25 group_1571 F4V73_RS00160 42168 42683 -1 mprA transcriptional repressor MprA Morganella psychrotolerans
26 group_1018 F4V73_RS03620 769974 770408 1 slyA transcriptional regulator SlyA Morganella psychrotolerans
27 group_1673 F4V73_RS08050 1671352 1671774 1 MarR family transcriptional regulator Morganella psychrotolerans
28 group_758 F4V73_RS11505 449390 449827 1 MarR family winged helix-turn-helix transcriptional regulator Morganella psychrotolerans
29 group_1847 F4V73_RS12680 135004 135441 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella psychrotolerans
30 group_1847 PMI_RS01205 295772 296209 1 hpaR homoprotocatechuate degradation operon regulator HpaR Proteus mirabilis HI4320
31 group_1571 PMI_RS02005 472371 472898 -1 mprA transcriptional repressor MprA Proteus mirabilis HI4320
32 group_1018 PMI_RS06715 1468403 1468831 -1 slyA transcriptional regulator SlyA Proteus mirabilis HI4320
33 group_1673 PMI_RS08980 1957841 1958281 1 MarR family transcriptional regulator Proteus mirabilis HI4320
34 group_758 PMI_RS17975 3949917 3950393 1 MarR family transcriptional regulator Proteus mirabilis HI4320