Orthogroup:group_1085


Homologs in group_1085

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06165 FBDBKF_06165 Morganella morganii S1 recC exodeoxyribonuclease V subunit gamma
EHELCC_09210 EHELCC_09210 Morganella morganii S2 recC exodeoxyribonuclease V subunit gamma
NLDBIP_09590 NLDBIP_09590 Morganella morganii S4 recC exodeoxyribonuclease V subunit gamma
LHKJJB_08165 LHKJJB_08165 Morganella morganii S3 recC exodeoxyribonuclease V subunit gamma
HKOGLL_07715 HKOGLL_07715 Morganella morganii S5 recC exodeoxyribonuclease V subunit gamma
F4V73_RS15750 F4V73_RS15750 Morganella psychrotolerans recC exodeoxyribonuclease V subunit gamma
PMI_RS11430 PMI_RS11430 Proteus mirabilis HI4320 recC exodeoxyribonuclease V subunit gamma

Distribution of group_1085 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1085 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1085

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1085.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 recC 7

Product

# Product Occurence
1 exodeoxyribonuclease V subunit gamma 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1330 7 L Replication, recombination and repair (L) Scaffold subunit RecC of the DNA repair enzyme RecBCD (exonuclease V)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03583 7 exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] Homologous recombination -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04257 7 Exodeoxyribonuclease V, gamma subunit
PF17946 7 RecC C-terminal domain

Annotations of the 22 SwissProt hits

Annotation Number of occurrences
ATP-dependent helicase/deoxyribonuclease subunit B 13
Exonuclease/helicase subunit RexB 1
RecBCD enzyme subunit RecC 8

Protein length

Min length 1125
Max length 1133
Mean length (sd) 1131.9 (3.0)
Median length 1133.0

Protein length distribution