Homologs in group_1885

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_11485 EHELCC_11485 100.0 Morganella morganii S2 hpaR homoprotocatechuate degradation operon regulator HpaR
NLDBIP_11830 NLDBIP_11830 100.0 Morganella morganii S4 hpaR homoprotocatechuate degradation operon regulator HpaR
LHKJJB_11690 LHKJJB_11690 100.0 Morganella morganii S3 hpaR homoprotocatechuate degradation operon regulator HpaR
HKOGLL_10300 HKOGLL_10300 100.0 Morganella morganii S5 hpaR homoprotocatechuate degradation operon regulator HpaR
F4V73_RS12680 F4V73_RS12680 92.3 Morganella psychrotolerans hpaR homoprotocatechuate degradation operon regulator HpaR
PMI_RS01205 PMI_RS01205 61.5 Proteus mirabilis HI4320 hpaR homoprotocatechuate degradation operon regulator HpaR

Distribution of the homologs in the orthogroup group_1885

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1885

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P62574 5.78e-62 189 61 0 142 3 hpcR Homoprotocatechuate degradative operon repressor Shigella flexneri
P62573 5.78e-62 189 61 0 142 4 hpcR Homoprotocatechuate degradative operon repressor Escherichia coli
P0DPR8 5.13e-42 139 54 0 121 1 farR HTH-type transcriptional regulator FarR Neisseria gonorrhoeae
Q93CC3 0.000162 42 29 0 67 3 hosA Transcriptional regulator HosA Escherichia coli
P69782 0.000162 42 29 0 67 1 hosA Transcriptional regulator HosA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q7ABA6 0.000179 42 29 0 67 3 hosA Transcriptional regulator HosA Escherichia coli O157:H7
Q4L8Q3 0.000204 42 25 1 89 3 sarZ HTH-type transcriptional regulator SarZ Staphylococcus haemolyticus (strain JCSC1435)
Q9F8R8 0.000337 41 29 0 67 3 hosA Transcriptional regulator HosA Escherichia coli O111:H-
P42195 0.000456 41 36 0 74 4 pecS HTH-type transcriptional regulator PecS Dickeya dadantii (strain 3937)
P52003 0.000511 41 26 0 106 1 mexR Multidrug resistance operon repressor Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13815
Feature type CDS
Gene hpaR
Product homoprotocatechuate degradation operon regulator HpaR
Location 56602 - 57033 (strand: -1)
Length 432 (nucleotides) / 143 (amino acids)
In genomic island -

Contig

Accession contig_17
Length 103646 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1885
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01047 MarR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1846 Transcription (K) K DNA-binding transcriptional regulator, MarR family

Protein Sequence

MHESLLIALLQAREVVLGYFRPTLKAHQLTEQQWRIIRILAKTPSLDFHLLAQKSCILRPSLTGILTRMEKAGIIHRLKPLSDQRKLYLSLTDEGTALYHRVQAEVETGYQALELQFTPEKVRQLYALLDDLVALPQRDNEEE

Flanking regions ( +/- flanking 50bp)

GATAACGTCGATGTTTATGATGTGAGTACATCGCGGAGAAATTACCCATTATGCATGAATCATTACTTATCGCCCTTTTGCAGGCCCGTGAAGTGGTCCTCGGCTATTTTCGCCCGACCCTGAAAGCACACCAACTGACGGAGCAGCAGTGGCGGATCATTCGCATACTGGCTAAGACCCCGTCGCTCGATTTTCATCTTCTGGCACAGAAAAGCTGTATTCTGCGTCCCAGCCTGACCGGTATTCTGACGCGGATGGAAAAAGCGGGCATTATCCACCGCCTCAAGCCCCTCAGTGATCAGCGCAAACTCTATCTCTCTCTGACTGACGAAGGTACGGCGCTGTATCACCGTGTGCAGGCGGAAGTGGAGACCGGCTATCAGGCGCTGGAATTACAGTTCACACCGGAGAAGGTTCGCCAGCTCTATGCACTGCTGGATGACCTGGTTGCACTGCCGCAGCGCGACAACGAAGAAGAATAAAAAAAGGCCGCTCAGATGAGCGGCATTTTTACAGTGGCAGGCTTACTTCT