Homologs in group_1018

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05685 FBDBKF_05685 76.1 Morganella morganii S1 slyA transcriptional regulator SlyA
EHELCC_11905 EHELCC_11905 76.1 Morganella morganii S2 slyA transcriptional regulator SlyA
NLDBIP_12245 NLDBIP_12245 76.1 Morganella morganii S4 slyA transcriptional regulator SlyA
LHKJJB_12105 LHKJJB_12105 76.1 Morganella morganii S3 slyA transcriptional regulator SlyA
HKOGLL_10720 HKOGLL_10720 76.1 Morganella morganii S5 slyA transcriptional regulator SlyA
F4V73_RS03620 F4V73_RS03620 78.2 Morganella psychrotolerans slyA transcriptional regulator SlyA

Distribution of the homologs in the orthogroup group_1018

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1018

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B5XWN4 3.02e-74 221 77 0 140 3 slyA Transcriptional regulator SlyA Klebsiella pneumoniae (strain 342)
P0A8W4 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Shigella flexneri
P0A8W2 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli (strain K12)
A8A0I5 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O9:H4 (strain HS)
B1XFV4 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli (strain K12 / DH10B)
C4ZYA5 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M0J9 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O8 (strain IAI1)
B5Z476 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A8W3 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O157:H7
B7L5J5 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli (strain 55989 / EAEC)
A7ZMA4 1.01e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O139:H28 (strain E24377A / ETEC)
B1LEP4 1.3e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli (strain SMS-3-5 / SECEC)
B7NB96 1.3e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A4U4 1.3e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7MVC0 1.3e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O81 (strain ED1a)
B7NTZ0 1.3e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7M9Z6 1.3e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O45:K1 (strain S88 / ExPEC)
P0A4U5 1.3e-73 219 78 0 140 3 slyA Transcriptional regulator SlyA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q2NT07 7.26e-73 217 75 0 142 3 slyA Transcriptional regulator SlyA Sodalis glossinidius (strain morsitans)
B1JJ73 8.11e-73 217 77 0 141 1 slyA Transcriptional regulator SlyA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
P69989 8.11e-73 217 77 0 141 2 slyA Transcriptional regulator SlyA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TIR6 8.11e-73 217 77 0 141 3 slyA Transcriptional regulator SlyA Yersinia pestis (strain Pestoides F)
Q1CIM0 8.11e-73 217 77 0 141 3 slyA Transcriptional regulator SlyA Yersinia pestis bv. Antiqua (strain Nepal516)
A9QZA1 8.11e-73 217 77 0 141 3 slyA Transcriptional regulator SlyA Yersinia pestis bv. Antiqua (strain Angola)
P69988 8.11e-73 217 77 0 141 3 slyA Transcriptional regulator SlyA Yersinia pestis
A7FHL4 8.11e-73 217 77 0 141 3 slyA Transcriptional regulator SlyA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P61091 1.69e-72 216 75 0 141 3 slyA Transcriptional regulator SlyA Salmonella typhi
B5BKC5 1.69e-72 216 75 0 141 3 slyA Transcriptional regulator SlyA Salmonella paratyphi A (strain AKU_12601)
C0Q5T8 1.69e-72 216 75 0 141 3 slyA Transcriptional regulator SlyA Salmonella paratyphi C (strain RKS4594)
Q5PH01 1.69e-72 216 75 0 141 3 slyA Transcriptional regulator SlyA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P61090 1.69e-72 216 75 0 141 3 slyA Transcriptional regulator SlyA Salmonella choleraesuis (strain SC-B67)
Q8D2L8 2.32e-72 216 75 0 142 3 slyA Transcriptional regulator SlyA Wigglesworthia glossinidia brevipalpis
B2U2E2 2.8e-72 216 77 0 140 3 slyA Transcriptional regulator SlyA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q8KM02 6.73e-72 214 75 0 141 3 slyA Transcriptional regulator SlyA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q9S3W0 1.58e-71 214 75 0 141 3 slyA Transcriptional regulator SlyA Yersinia enterocolitica
A1JNY1 1.58e-71 214 75 0 141 3 slyA Transcriptional regulator SlyA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A8GDX5 2.65e-71 213 73 0 142 3 slyA Transcriptional regulator SlyA Serratia proteamaculans (strain 568)
Q1C786 2.71e-71 213 76 0 141 3 slyA Transcriptional regulator SlyA Yersinia pestis bv. Antiqua (strain Antiqua)
P40676 4.84e-71 213 75 0 141 1 slyA Transcriptional regulator SlyA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q492T9 5.11e-71 212 75 0 142 3 slyA Transcriptional regulator SlyA Blochmanniella pennsylvanica (strain BPEN)
C5BE36 2.32e-69 208 73 0 142 3 slyA Transcriptional regulator SlyA Edwardsiella ictaluri (strain 93-146)
Q9RB09 5.1e-69 207 70 0 142 3 slyA Transcriptional regulator SlyA Pectobacterium carotovorum subsp. carotovorum
C6DK30 5.63e-69 207 70 0 142 3 slyA Transcriptional regulator SlyA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q9F6B2 7.66e-69 207 71 0 142 3 slyA Transcriptional regulator SlyA Edwardsiella tarda
Q6D5V7 1.4e-68 206 70 0 142 3 slyA Transcriptional regulator SlyA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q7VR54 1.84e-68 206 70 0 142 3 slyA Transcriptional regulator SlyA Blochmanniella floridana
Q9RA96 1.3e-65 199 69 0 142 3 slyA Transcriptional regulator SlyA Serratia sp. (strain ATCC 39006)
P94578 1.41e-08 53 27 2 111 4 ywoH Uncharacterized HTH-type transcriptional regulator YwoH Bacillus subtilis (strain 168)
O33817 2.29e-07 50 31 2 110 4 None Putative transcriptional regulatory protein for hcr operon Thauera aromatica
P42195 0.000203 42 30 0 95 4 pecS HTH-type transcriptional regulator PecS Dickeya dadantii (strain 3937)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06715
Feature type CDS
Gene slyA
Product transcriptional regulator SlyA
Location 1468403 - 1468831 (strand: -1)
Length 429 (nucleotides) / 142 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1018
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01047 MarR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1846 Transcription (K) K DNA-binding transcriptional regulator, MarR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin - -

Protein Sequence

MESTLGADLARLVRLWRALIDHRLKPLKLTQTHWVTLYNISQLPPEQSQIQLAKAIGIEQPSLVRTLDQLEEKKLICRHTCSSDRRAKRITLTKESEPFISEVYAVIEKTRQEILSGIKKEEIDNLIYLIKKLEKNIIRLHD

Flanking regions ( +/- flanking 50bp)

TATCTAAACTTTGTAAAAGCTGAAAGAAAAGCGAATTTAAGGAGGGATAAGTGGAATCAACATTAGGAGCTGATTTAGCGCGTTTAGTTCGATTATGGCGTGCCTTAATTGATCACCGACTCAAGCCATTAAAATTGACCCAAACTCATTGGGTAACGTTGTATAATATTAGTCAACTGCCTCCAGAACAATCTCAAATCCAATTGGCTAAAGCAATTGGTATTGAACAACCATCATTAGTGAGAACTCTCGATCAGTTAGAAGAAAAAAAATTGATTTGTAGACATACTTGTTCAAGTGATCGCAGAGCAAAGCGTATAACGTTAACAAAAGAATCAGAACCTTTTATTTCAGAAGTTTATGCAGTTATTGAGAAGACACGTCAAGAAATATTAAGTGGTATAAAGAAGGAAGAAATAGACAACTTGATTTATCTTATTAAAAAGCTAGAGAAAAATATAATTAGATTACATGACTAATTAAATTGGGCTAATTTACAGCAATTTTATTTCTAATGGTTTTATTTGTA