Orthogroup:group_1885


Homologs in group_1885

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14090 FBDBKF_14090 Morganella morganii S1 menF Isochorismate synthase EntC
EHELCC_08190 EHELCC_08190 Morganella morganii S2 menF Isochorismate synthase EntC
NLDBIP_08515 NLDBIP_08515 Morganella morganii S4 menF Isochorismate synthase EntC
LHKJJB_05750 LHKJJB_05750 Morganella morganii S3 menF Isochorismate synthase EntC
HKOGLL_05165 HKOGLL_05165 Morganella morganii S5 menF Isochorismate synthase EntC
F4V73_RS02845 F4V73_RS02845 Morganella psychrotolerans - isochorismate synthase
PMI_RS08570 PMI_RS08570 Proteus mirabilis HI4320 - isochorismate synthase

Distribution of group_1885 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1885 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1885

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1885.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 menF 5
2 - 2

Product

# Product Occurence
1 Isochorismate synthase EntC 5
2 isochorismate synthase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1169 7 HQ Coenzyme transport and metabolism (H)
Secondary metabolites biosynthesis, transport and catabolism (Q)		 Isochorismate synthase EntC

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00425 7 chorismate binding enzyme

Annotations of the 103 SwissProt hits

Annotation Number of occurrences
2-amino-4-deoxychorismate synthase 1
Aminodeoxychorismate synthase 2
Aminodeoxychorismate synthase component 1 6
Aminodeoxychorismate synthase, chloroplastic 2
Anthranilate synthase 2
Anthranilate synthase alpha subunit 1, chloroplastic 3
Anthranilate synthase alpha subunit 2, chloroplastic 2
Anthranilate synthase component 1 52
Anthranilate synthase component 1 1 2
Anthranilate synthase component 1 2 2
Anthranilate synthase component 1 3 1
Anthranilate synthase component 1, pyocyanine specific 1
Anthranilate synthase component I-like protein 1
Anthranilate synthase, phenazine specific 2
Isochorismate synthase 1, chloroplastic 1
Isochorismate synthase 2, chloroplastic 1
Isochorismate synthase DhbC 1
Isochorismate synthase EntC 2
Isochorismate synthase MenF 4
Isochorismate synthase, chloroplastic 1
Probable aminodeoxychorismate synthase, chloroplastic 1
Probable anthranilate synthase component 1 1
Putative aminodeoxychorismate synthase 1
Putative isochorismate synthase 1
Putative isochorismate synthase MenF 2
Salicylate biosynthesis isochorismate synthase 1
Salicylate synthase 4
Uncharacterized PabA-like protein HI_1170 1
Uncharacterized PabA-like protein PM1464 1
Vibriobactin-specific isochorismate synthase 1

Protein length

Min length 442
Max length 445
Mean length (sd) 443.1 (0.9)
Median length 443.0

Protein length distribution