PF12698

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF12698
Protein list: lists the 42 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF12698
Description ABC-2 family transporter protein

Occurence in the database

PF12698 is associated with 42 different proteins
The 42 proteins are classified into 6 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_964 FBDBKF_04670 133739 136498 1 rbbA ribosome-associated ATPase/putative transporter RbbA Morganella morganii S1
1 group_965 FBDBKF_04675 136500 137624 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S1
2 group_1469 FBDBKF_08730 128269 129354 1 ABC transporter permease Morganella morganii S1
3 group_1470 FBDBKF_08735 129351 130514 1 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family Morganella morganii S1
4 group_1528 FBDBKF_09555 9837 10973 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S1
5 group_1529 FBDBKF_09560 10984 12081 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S1
6 group_1528 EHELCC_04355 201802 202938 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S2
7 group_1529 EHELCC_04360 202949 204046 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S2
8 group_964 EHELCC_05960 193196 195955 1 rbbA ribosome-associated ATPase/putative transporter RbbA Morganella morganii S2
9 group_965 EHELCC_05965 195957 197081 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S2
10 group_1470 EHELCC_12790 33211 34374 -1 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family Morganella morganii S2
11 group_1469 EHELCC_12795 34371 35456 -1 ABC transporter permease Morganella morganii S2
12 group_1528 NLDBIP_04355 201598 202734 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S4
13 group_1529 NLDBIP_04360 202745 203842 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S4
14 group_964 NLDBIP_06280 234261 237020 1 rbbA ribosome-associated ATPase/putative transporter RbbA Morganella morganii S4
15 group_965 NLDBIP_06285 237022 238146 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S4
16 group_1470 NLDBIP_13130 33211 34374 -1 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family Morganella morganii S4
17 group_1469 NLDBIP_13135 34371 35456 -1 ABC transporter permease Morganella morganii S4
18 group_964 LHKJJB_03160 211785 214544 1 rbbA ribosome-associated ATPase/putative transporter RbbA Morganella morganii S3
19 group_965 LHKJJB_03165 214546 215670 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S3
20 group_1469 LHKJJB_13420 126987 128072 1 ABC transporter permease Morganella morganii S3
21 group_1470 LHKJJB_13425 128069 129232 1 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family Morganella morganii S3
22 group_1529 LHKJJB_14270 131536 132633 -1 yadH ABC-type multidrug transport system, permease component Morganella morganii S3
23 group_1528 LHKJJB_14275 132644 133780 -1 yadH ABC-type multidrug transport system, permease component Morganella morganii S3
24 group_964 HKOGLL_06635 133649 136408 1 rbbA ribosome-associated ATPase/putative transporter RbbA Morganella morganii S5
25 group_965 HKOGLL_06640 136410 137534 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S5
26 group_1470 HKOGLL_11605 33211 34374 -1 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family Morganella morganii S5
27 group_1469 HKOGLL_11610 34371 35456 -1 ABC transporter permease Morganella morganii S5
28 group_1528 HKOGLL_12260 10618 11754 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S5
29 group_1529 HKOGLL_12265 11765 12862 1 yadH ABC-type multidrug transport system, permease component Morganella morganii S5
30 group_1529 F4V73_RS00805 166057 167154 -1 ABC transporter permease Morganella psychrotolerans
31 group_1528 F4V73_RS00810 167165 168313 -1 ABC transporter permease Morganella psychrotolerans
32 group_964 F4V73_RS09135 1911420 1914179 1 rbbA ribosome-associated ATPase/putative transporter RbbA Morganella psychrotolerans
33 group_965 F4V73_RS09140 1914179 1915303 1 ABC transporter permease Morganella psychrotolerans
34 group_1469 F4V73_RS09950 96800 97942 1 ABC transporter permease Morganella psychrotolerans
35 group_1470 F4V73_RS09955 97939 99105 1 ABC transporter permease Morganella psychrotolerans
36 group_1529 PMI_RS03030 667062 668171 -1 ABC transporter permease Proteus mirabilis HI4320
37 group_1528 PMI_RS03035 668187 669338 -1 ABC transporter permease Proteus mirabilis HI4320
38 group_964 PMI_RS05905 1294858 1297626 1 rbbA ribosome-associated ATPase/putative transporter RbbA Proteus mirabilis HI4320
39 group_965 PMI_RS05910 1297627 1298754 1 ABC transporter permease Proteus mirabilis HI4320
40 group_1469 PMI_RS17110 3763501 3764646 1 ABC transporter permease Proteus mirabilis HI4320
41 group_1470 PMI_RS17115 3764646 3765809 1 ABC transporter permease Proteus mirabilis HI4320