Homologs in group_1469

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08730 FBDBKF_08730 79.5 Morganella morganii S1 - ABC transporter permease
EHELCC_12795 EHELCC_12795 79.5 Morganella morganii S2 - ABC transporter permease
NLDBIP_13135 NLDBIP_13135 79.5 Morganella morganii S4 - ABC transporter permease
LHKJJB_13420 LHKJJB_13420 79.5 Morganella morganii S3 - ABC transporter permease
HKOGLL_11610 HKOGLL_11610 79.5 Morganella morganii S5 - ABC transporter permease
F4V73_RS09950 F4V73_RS09950 76.3 Morganella psychrotolerans - ABC transporter permease

Distribution of the homologs in the orthogroup group_1469

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1469

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P94442 1.52e-05 50 22 10 349 1 lnrN Linearmycin resistance permease protein LnrN Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17110
Feature type CDS
Gene -
Product ABC transporter permease
Location 3763501 - 3764646 (strand: 1)
Length 1146 (nucleotides) / 381 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1469
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12698 ABC-2 family transporter protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0842 Defense mechanisms (V) V ABC-type multidrug transport system, permease component

Protein Sequence

MRVKAAWRGFNSAFSRETHMAVRSPVFHWLSWLFPLMLFTLISANFSEGTLLNLPVSVINNDNSPLSKTLIRDLNAGSHAKLSALDTNPRTALEQLGSAKDYAILMIPRHFEKDVLAGKQPTTRMYYNGLYYAAGSYAIQDFSGLIAELNAQYRTVLAQEMNKPVPPLAKVTLSYDSLFNASGSYIYYQQFAATIHMLQLFVVTCTIYSLSRGNMLLNLKPFTFALIGKLAPYTLFFLTLLMVELAALVHFSGAKVNGNPLYMILVGFFYIIAAQSIGLLLFTFTNSAITAYSMIGMLVSIALAFSGMAVPELSMILPARIISNLEPLTHALNAMFDIFLREVSLQGILYVCTLLLIYPFAIALLVRKRIFKRLELQVGVV

Flanking regions ( +/- flanking 50bp)

TACGTCCTGGTATGAGCGCATTATGGCGTTGGGATAAGTAAGGGCGAATAATGAGAGTAAAGGCAGCTTGGCGTGGTTTTAATAGCGCATTCTCACGAGAAACCCATATGGCAGTGCGAAGCCCAGTGTTCCACTGGCTAAGCTGGCTGTTTCCATTAATGTTATTCACATTAATTAGTGCTAACTTTTCAGAAGGTACTTTGCTGAACTTGCCAGTTTCCGTTATCAATAATGATAATAGTCCACTATCAAAAACGTTGATCCGAGATTTAAATGCAGGCTCTCATGCAAAATTAAGTGCACTAGATACAAATCCGCGAACCGCCTTAGAGCAGCTAGGAAGTGCAAAAGATTACGCTATTTTAATGATCCCCCGCCATTTTGAAAAAGATGTATTAGCAGGCAAACAGCCGACAACCCGAATGTATTACAATGGGTTGTATTATGCTGCGGGTAGCTATGCTATACAGGATTTTAGCGGGTTAATTGCCGAGCTTAATGCTCAATATCGCACTGTTTTAGCGCAAGAGATGAATAAGCCAGTGCCGCCTTTAGCCAAAGTAACACTCTCTTATGACAGCCTGTTTAATGCTAGTGGTAGTTATATCTACTATCAACAATTTGCTGCAACCATTCATATGCTGCAACTCTTTGTTGTCACCTGCACGATTTACTCCTTATCACGGGGTAATATGCTATTAAACCTAAAACCTTTCACTTTTGCCCTAATAGGTAAATTAGCACCTTATACGCTGTTTTTCTTAACATTATTAATGGTTGAATTAGCGGCGTTAGTGCATTTTTCAGGGGCAAAAGTCAATGGTAATCCGCTTTATATGATATTGGTGGGGTTCTTTTATATCATCGCGGCACAAAGTATTGGGTTGCTGTTGTTTACATTTACCAATAGTGCGATAACCGCATACAGTATGATAGGTATGCTAGTGAGTATCGCCTTAGCTTTTTCAGGGATGGCGGTGCCTGAACTGTCGATGATATTACCTGCTCGAATCATTTCTAATCTAGAGCCGTTAACGCACGCCTTAAATGCTATGTTTGATATCTTCTTAAGGGAAGTTTCGTTACAAGGTATTCTTTATGTGTGCACGCTTTTGTTGATTTATCCTTTTGCGATTGCGCTTTTAGTTCGCAAACGCATCTTTAAAAGATTGGAATTACAGGTAGGTGTCGTATGATGCAGATGTATTTCCAAACATTTAAGCGTGTTTTATTAGGCATGTTAGAA