Homologs in group_1413

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08730 FBDBKF_08730 100.0 Morganella morganii S1 - ABC transporter permease
EHELCC_12795 EHELCC_12795 100.0 Morganella morganii S2 - ABC transporter permease
NLDBIP_13135 NLDBIP_13135 100.0 Morganella morganii S4 - ABC transporter permease
HKOGLL_11610 HKOGLL_11610 100.0 Morganella morganii S5 - ABC transporter permease
F4V73_RS09950 F4V73_RS09950 90.9 Morganella psychrotolerans - ABC transporter permease
PMI_RS17110 PMI_RS17110 79.5 Proteus mirabilis HI4320 - ABC transporter permease

Distribution of the homologs in the orthogroup group_1413

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1413

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_13420
Feature type CDS
Gene -
Product ABC transporter permease
Location 126987 - 128072 (strand: 1)
Length 1086 (nucleotides) / 361 (amino acids)

Contig

Accession ZDB_370
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1413
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF12698 ABC-2 family transporter protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0842 Defense mechanisms (V) V ABC-type multidrug transport system, permease component

Protein Sequence

MAIRSPVFHWLSWLFPLILFTLISANFSEGTLLNLPVSAVDYDHSPLSRTLVRNLNAASHASITPRDDPSAALERMGSAEDYAILMIPKRFESDVLAGKQPTVRMYYNGLFYASGSYAIQDFSGLIAELNAQYRTVLASETGKTLPKLAQVTMSYDSLFNASGSYIYYQQFAATIHMLQLFVVTLTIYSMSRGTMLLTLKPLFSGVLGKLAPYTLFFTALLMVELAALVTFSGAKVAGNPLYMLFIGFFYVMAAQSIGLLLYTFTSNALMAYSMIGMLVSIAMAFSGMAVPELSMILPARIISNLEPLTHALNAMFDIFLREVSLLHILYVCALLLIYPVANAFFVRNRLPKRLALQGGAV

Flanking regions ( +/- flanking 50bp)

TACCGGTTATCTGGTACAGCTTTCGCCACGCCTTCACACAGGAAACCCGGATGGCTATCCGCAGCCCGGTGTTCCACTGGCTGAGCTGGTTATTTCCGCTGATCTTATTCACACTGATCAGCGCGAACTTTTCAGAGGGAACACTGCTGAATCTGCCGGTCTCTGCGGTGGATTATGACCACAGTCCGCTCTCGCGGACGCTGGTGCGCAATCTGAACGCTGCTTCACACGCCAGTATCACGCCGCGGGATGATCCTTCGGCAGCACTGGAGCGGATGGGCAGTGCGGAAGATTACGCGATCCTGATGATCCCGAAACGTTTTGAAAGTGATGTACTGGCCGGAAAGCAGCCGACAGTCCGGATGTATTACAACGGGTTATTTTATGCCTCCGGCAGCTATGCGATTCAGGATTTCAGCGGGCTGATAGCAGAACTTAATGCACAGTACCGCACTGTCCTCGCATCAGAAACGGGCAAAACGCTGCCGAAACTGGCACAGGTCACTATGTCATACGACAGCCTGTTTAACGCCAGCGGCAGTTATATTTATTATCAGCAGTTTGCCGCCACCATCCATATGCTCCAGTTATTTGTTGTCACGCTGACTATTTACAGTATGTCGCGCGGTACCATGCTGCTGACGCTTAAACCGCTGTTCAGTGGTGTGCTGGGGAAACTGGCACCGTATACGCTGTTTTTTACCGCTCTGCTGATGGTGGAGCTGGCTGCCCTGGTGACGTTTTCCGGCGCCAAAGTGGCGGGTAACCCGCTGTATATGCTGTTTATCGGCTTCTTTTATGTGATGGCGGCACAGAGTATCGGCCTGCTGCTCTACACCTTCACCAGCAATGCGCTGATGGCTTACAGTATGATTGGTATGCTGGTCAGTATCGCCATGGCGTTTTCCGGCATGGCGGTGCCGGAGCTGTCTATGATCCTGCCGGCCAGGATTATCTCTAACCTTGAGCCGCTGACTCACGCACTCAATGCGATGTTTGATATCTTCCTGCGAGAAGTGTCGCTGCTGCATATTCTGTATGTCTGTGCATTATTGCTGATTTATCCGGTAGCCAATGCCTTTTTTGTCCGTAACCGGTTACCGAAACGGCTGGCATTGCAGGGAGGTGCGGTATGAAACTCTATTTCCAGACGTTCCTGAAAGTCCTGCTGGGAATGCTGGCAAAA