Homologs in group_1470

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08735 FBDBKF_08735 100.0 Morganella morganii S1 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
EHELCC_12790 EHELCC_12790 100.0 Morganella morganii S2 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
NLDBIP_13130 NLDBIP_13130 100.0 Morganella morganii S4 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
LHKJJB_13425 LHKJJB_13425 100.0 Morganella morganii S3 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
F4V73_RS09955 F4V73_RS09955 92.0 Morganella psychrotolerans - ABC transporter permease
PMI_RS17115 PMI_RS17115 77.8 Proteus mirabilis HI4320 - ABC transporter permease

Distribution of the homologs in the orthogroup group_1470

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1470

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8T674 6.69e-12 70 23 8 306 3 abcG20 ABC transporter G family member 20 Dictyostelium discoideum
P0AFQ1 6.81e-05 48 19 8 282 3 ybhR Probable multidrug ABC transporter permease YbhR Shigella flexneri
P0AFP9 6.81e-05 48 19 8 282 1 ybhR Probable multidrug ABC transporter permease YbhR Escherichia coli (strain K12)
P0AFQ0 6.81e-05 48 19 8 282 3 ybhR Probable multidrug ABC transporter permease YbhR Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_11605
Feature type CDS
Gene yhgE
Product Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
Location 33211 - 34374 (strand: -1)
Length 1164 (nucleotides) / 387 (amino acids)
In genomic island -

Contig

Accession ZDB_689
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1470
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12698 ABC-2 family transporter protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0842 Defense mechanisms (V) V ABC-type multidrug transport system, permease component

Protein Sequence

MKLYFQTFLKVLLGMLAKPMWMLLVVSLCVMSLVYVRPVLWDLPVAVIDQDHSAASRSLIRQLDATAKVELHGYDNLETARRDMIMRELFAIIIIPTDFERNILQGKNITVPVFGDATNRLASGQIQQELSKAYQELLGGYNTRILQDAGYTPEQASLIISPIQSETVAMYNPGVSFAAIVFPGLLVMLLQHSLLIACVRVSIAVRSTPKGKPPLAVYLGALSALLPIWLFLSTVFFALWPWVLGYRQEAPMYELWLLTFPFLLGVLGLGKLVTECLRSVEMIYLTLAFVTTPVFYMSGTIWPLQAMPDWVRFIASALPSTWATKAIAGINQMDLPFSSVQNDIIMMLVLGIIYTLLGVFIGMLRDGELRRITHSLRRLFRRKKRAC

Flanking regions ( +/- flanking 50bp)

TTTGTCCGTAACCGGTTACCGAAACGGCTGGCATTGCAGGGAGGTGCGGTATGAAACTCTATTTCCAGACGTTCCTGAAAGTCCTGCTGGGAATGCTGGCAAAACCGATGTGGATGCTGCTGGTGGTTTCACTGTGTGTGATGAGCCTGGTGTATGTCCGGCCGGTCTTGTGGGATCTGCCTGTCGCCGTGATTGACCAGGATCACTCCGCAGCCAGCCGCTCACTGATCCGGCAGCTGGATGCAACCGCCAAAGTGGAGCTGCACGGTTATGACAACCTGGAGACGGCACGGCGCGATATGATTATGCGCGAGTTATTCGCCATCATTATTATTCCGACTGATTTTGAGCGAAATATTCTCCAGGGTAAAAATATCACTGTCCCGGTATTCGGGGATGCGACGAACCGCCTCGCCAGCGGGCAGATCCAGCAGGAGCTGAGCAAGGCATATCAGGAATTGCTGGGGGGATATAACACCCGTATTCTGCAGGATGCAGGCTATACACCGGAACAGGCGTCACTGATTATTTCACCGATACAGTCAGAAACGGTGGCTATGTATAACCCGGGTGTCAGCTTTGCGGCGATTGTGTTCCCCGGTCTGCTGGTCATGTTATTACAGCACTCCCTGCTGATAGCCTGTGTCCGTGTCAGTATCGCGGTGCGCAGTACGCCGAAAGGTAAACCGCCGCTGGCGGTGTATCTGGGGGCACTGAGTGCGCTGCTGCCTATCTGGCTGTTTCTCTCGACGGTCTTCTTTGCCCTGTGGCCGTGGGTGCTGGGATACCGCCAGGAAGCGCCGATGTATGAACTATGGCTGCTGACATTCCCGTTCCTGCTGGGGGTGCTGGGCTTGGGTAAACTGGTTACTGAATGTCTGCGCAGTGTGGAGATGATTTACCTGACACTGGCTTTTGTCACCACTCCGGTCTTTTATATGTCAGGTACTATCTGGCCGTTACAGGCTATGCCGGACTGGGTGCGGTTTATTGCTTCCGCACTGCCGTCCACCTGGGCGACCAAAGCGATTGCCGGGATCAACCAGATGGATTTACCGTTCAGCAGCGTGCAGAACGATATTATTATGATGCTGGTGCTCGGGATTATTTATACGCTTCTCGGGGTCTTTATCGGTATGTTGCGTGACGGGGAATTACGGCGTATTACGCATTCCCTGCGACGGTTATTCCGGCGGAAAAAAAGAGCCTGTTAAATAAATGAAATCCCGTTCTCACGGTTTCTGGGGGAAAAGAGGATCAGGGT