Homologs in group_1470

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08735 FBDBKF_08735 77.8 Morganella morganii S1 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
EHELCC_12790 EHELCC_12790 77.8 Morganella morganii S2 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
NLDBIP_13130 NLDBIP_13130 77.8 Morganella morganii S4 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
LHKJJB_13425 LHKJJB_13425 77.8 Morganella morganii S3 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
HKOGLL_11605 HKOGLL_11605 77.8 Morganella morganii S5 yhgE Uncharacterized membrane protein YhgE, phage infection protein (PIP) family
F4V73_RS09955 F4V73_RS09955 77.3 Morganella psychrotolerans - ABC transporter permease

Distribution of the homologs in the orthogroup group_1470

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1470

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8T674 6.64e-15 80 24 9 318 3 abcG20 ABC transporter G family member 20 Dictyostelium discoideum
P0AFQ1 8.06e-05 48 22 14 285 3 ybhR Probable multidrug ABC transporter permease YbhR Shigella flexneri
P0AFP9 8.06e-05 48 22 14 285 1 ybhR Probable multidrug ABC transporter permease YbhR Escherichia coli (strain K12)
P0AFQ0 8.06e-05 48 22 14 285 3 ybhR Probable multidrug ABC transporter permease YbhR Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17115
Feature type CDS
Gene -
Product ABC transporter permease
Location 3764646 - 3765809 (strand: 1)
Length 1164 (nucleotides) / 387 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1470
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12698 ABC-2 family transporter protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0842 Defense mechanisms (V) V ABC-type multidrug transport system, permease component

Protein Sequence

MQMYFQTFKRVLLGMLEKPMWMLLLVSLCIMSLVYAKPVLWDLPVAVINQDHSPASYALIRSLDATPKLSLKGYDNLDEARHDMIMRELFAIIIIPTDFEKKLLNGKNVTVPVYGDATNRLASGQIQQELMQAYQQLLDNYNGRILQNAGFSATQSKILLKPIQSETIAMYNPGVSFAAIIFPGLLVMLLQHSLLIACVRVSIAVRGTPKGKPPLAVYLGALSALIPIWLFLSSVFFALWPWVLGYRQEAPLYQIWMLTFPFLLAVLGLGKLITECLRSVEMIYLTLAFVTTPVFYISGTIWPLQAMPDWVLAISSALPSTWAVNAMAGINQMGLSFQSILGDIVMMLVLGVIYTILGVLVGMLRNGELRKITHQFKHWARHYHRSK

Flanking regions ( +/- flanking 50bp)

GTTCGCAAACGCATCTTTAAAAGATTGGAATTACAGGTAGGTGTCGTATGATGCAGATGTATTTCCAAACATTTAAGCGTGTTTTATTAGGCATGTTAGAAAAACCGATGTGGATGTTATTATTGGTTTCTCTTTGCATTATGAGTTTAGTCTACGCTAAACCTGTATTGTGGGATCTGCCTGTGGCGGTGATCAATCAAGATCATAGCCCCGCCAGTTATGCCCTTATCCGCTCATTAGATGCCACACCTAAATTAAGCTTAAAGGGATATGATAATTTAGATGAAGCTCGTCATGACATGATCATGCGTGAACTGTTTGCCATTATTATCATTCCAACAGATTTTGAAAAAAAACTGCTTAATGGCAAAAATGTTACCGTTCCTGTGTATGGAGATGCGACCAACCGCCTTGCTAGTGGACAAATTCAGCAAGAATTAATGCAGGCGTATCAGCAATTATTAGATAACTATAACGGCCGTATCTTACAAAATGCGGGTTTTAGTGCGACACAGTCAAAAATATTATTAAAACCGATCCAAAGTGAAACTATCGCCATGTATAACCCTGGGGTCAGTTTTGCCGCCATTATTTTCCCAGGCTTGTTAGTGATGTTATTGCAACACTCATTATTAATTGCTTGTGTACGAGTGAGTATCGCCGTCAGAGGAACGCCAAAAGGGAAGCCTCCGTTAGCGGTATATTTAGGCGCGCTATCTGCACTTATACCGATTTGGCTCTTTTTATCTTCGGTGTTCTTTGCACTATGGCCGTGGGTATTAGGCTATCGTCAAGAAGCACCACTTTATCAAATTTGGATGTTGACCTTCCCATTCTTATTAGCGGTATTAGGATTAGGTAAGTTGATCACCGAATGCTTGCGCAGTGTTGAGATGATTTACTTAACATTGGCATTTGTGACGACACCAGTATTCTATATTTCGGGAACTATTTGGCCATTACAAGCTATGCCGGATTGGGTATTGGCAATATCCTCTGCATTACCTTCTACATGGGCTGTAAATGCTATGGCCGGAATTAACCAGATGGGATTATCATTCCAAAGCATCCTAGGGGATATCGTGATGATGCTGGTTTTAGGCGTGATATATACCATTTTGGGGGTGTTAGTGGGTATGTTGCGCAATGGTGAGTTAAGGAAAATTACTCATCAATTTAAGCATTGGGCGAGACATTACCACCGTTCAAAGTAAATAATATCTGTAATATGCTAGGTAAATAGGACGGGATTACTGAAAAGTTA