PF12848

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF12848
Protein list: lists the 28 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF12848
Description ABC transporter

Occurence in the database

PF12848 is associated with 28 different proteins
The 28 proteins are classified into 4 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_755 FBDBKF_02640 225421 227004 1 uup ABC-F family ATPase Morganella morganii S1
1 group_1210 FBDBKF_06590 157981 159627 1 ettA energy-dependent translational throttle protein EttA Morganella morganii S1
2 group_1312 FBDBKF_07300 142959 144878 1 uup ABC transporter ATP-binding protein Morganella morganii S1
3 group_307 FBDBKF_11800 10433 12361 1 uup ABC transporter ATP-binding protein Morganella morganii S1
4 group_755 EHELCC_03110 613241 614824 1 uup ABC-F family ATPase Morganella morganii S2
5 group_1312 EHELCC_03670 41308 43227 -1 uup ABC transporter ATP-binding protein Morganella morganii S2
6 group_1210 EHELCC_09635 158553 160199 1 ettA energy-dependent translational throttle protein EttA Morganella morganii S2
7 group_307 EHELCC_14505 122344 124272 -1 uup ABC transporter ATP-binding protein Morganella morganii S2
8 group_755 NLDBIP_00350 65312 66895 -1 uup ABC-F family ATPase Morganella morganii S4
9 group_1312 NLDBIP_03670 41104 43023 -1 uup ABC transporter ATP-binding protein Morganella morganii S4
10 group_1210 NLDBIP_10015 158553 160199 1 ettA energy-dependent translational throttle protein EttA Morganella morganii S4
11 group_307 NLDBIP_15600 126281 128209 -1 uup ABC transporter ATP-binding protein Morganella morganii S4
12 group_755 LHKJJB_01685 325790 327373 1 uup ABC-F family ATPase Morganella morganii S3
13 group_1210 LHKJJB_07740 57039 58685 -1 ettA energy-dependent translational throttle protein EttA Morganella morganii S3
14 group_1312 LHKJJB_09500 41218 43137 -1 uup ABC transporter ATP-binding protein Morganella morganii S3
15 group_307 LHKJJB_15010 10433 12361 1 uup ABC transporter ATP-binding protein Morganella morganii S3
16 group_755 HKOGLL_01725 331301 332884 1 uup ABC-F family ATPase Morganella morganii S5
17 group_1210 HKOGLL_07290 57039 58685 -1 ettA energy-dependent translational throttle protein EttA Morganella morganii S5
18 group_1312 HKOGLL_09475 147915 149834 1 uup ABC transporter ATP-binding protein Morganella morganii S5
19 group_307 HKOGLL_19275 990 2918 -1 uup ABC transporter ATP-binding protein Morganella morganii S5
20 group_1312 F4V73_RS01485 331381 333297 1 ABC transporter ATP-binding protein Morganella psychrotolerans
21 group_755 F4V73_RS05095 1085545 1087152 1 ABC-F family ATPase Morganella psychrotolerans
22 group_307 F4V73_RS14855 205854 207785 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
23 group_1210 F4V73_RS15355 55718 57385 -1 ettA energy-dependent translational throttle protein EttA Morganella psychrotolerans
24 group_1312 PMI_RS03810 862999 864930 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320
25 group_755 PMI_RS06070 1330564 1332162 -1 ABC-F family ATPase Proteus mirabilis HI4320
26 group_307 PMI_RS13865 3078650 3080581 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320
27 group_1210 PMI_RS18470 4054931 4056598 -1 ettA energy-dependent translational throttle protein EttA Proteus mirabilis HI4320