Orthogroup:group_1312


Homologs in group_1312

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08035 FBDBKF_08035 Morganella morganii S1 mrcB bifunctional glycosyl transferase/transpeptidase
EHELCC_13865 EHELCC_13865 Morganella morganii S2 mrcB bifunctional glycosyl transferase/transpeptidase
NLDBIP_14310 NLDBIP_14310 Morganella morganii S4 mrcB bifunctional glycosyl transferase/transpeptidase
LHKJJB_08540 LHKJJB_08540 Morganella morganii S3 mrcB bifunctional glycosyl transferase/transpeptidase
HKOGLL_08090 HKOGLL_08090 Morganella morganii S5 mrcB bifunctional glycosyl transferase/transpeptidase
F4V73_RS12955 F4V73_RS12955 Morganella psychrotolerans mrcB bifunctional glycosyl transferase/transpeptidase
PMI_RS00980 PMI_RS00980 Proteus mirabilis HI4320 mrcB bifunctional glycosyl transferase/transpeptidase

Distribution of group_1312 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1312 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1312

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1312.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mrcB 7

Product

# Product Occurence
1 bifunctional glycosyl transferase/transpeptidase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0744 7 M Cell wall/membrane/envelope biogenesis (M) Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05365 7 penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] Peptidoglycan biosynthesis
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00905 7 Penicillin binding protein transpeptidase domain
PF00912 7 Transglycosylase
PF14812 6 Transmembrane domain of transglycosylase PBP1 at N-terminal
PF14814 7 Bifunctional transglycosylase second domain

Annotations of the 235 SwissProt hits

Annotation Number of occurrences
Biosynthetic peptidoglycan transglycosylase 167
Biosynthetic peptidoglycan transglycosylase (Fragment) 1
Monofunctional glycosyltransferase 18
Penicillin-binding protein 1A 32
Penicillin-binding protein 1A (Fragment) 1
Penicillin-binding protein 1A/1B 1
Penicillin-binding protein 1B 5
Penicillin-binding protein 1C 1
Penicillin-binding protein 1F 1
Penicillin-binding protein 2A 1
Penicillin-binding protein 2D 1
Penicillin-binding protein 2a 2
Penicillin-binding protein 4 1
Penicillin-binding protein PbpB 1
Putative transglycosylase H16_A0665 1
Uncharacterized protein in pulS 3'region (Fragment) 1

Protein length

Min length 770
Max length 837
Mean length (sd) 826.0 (24.7)
Median length 835.0

Protein length distribution