PF05638

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF05638
Protein list: lists the 33 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF05638
Description Type VI secretion system effector, Hcp

Occurence in the database

PF05638 is associated with 33 different proteins
The 33 proteins are classified into 5 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2487 FBDBKF_01365 268855 269334 1 Type VI secretion system tube protein Hcp Morganella morganii S1
1 group_40 FBDBKF_01535 307831 308310 1 Hcp family type VI secretion system effector Morganella morganii S1
2 group_126 FBDBKF_16725 26941 27459 -1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S1
3 group_40 FBDBKF_18025 4562 5041 1 Hcp family type VI secretion system effector Morganella morganii S1
4 group_40 EHELCC_00010 558 1037 -1 Hcp family type VI secretion system effector Morganella morganii S2
5 group_2487 EHELCC_00180 39534 40013 -1 Type VI secretion system tube protein Hcp Morganella morganii S2
6 group_126 EHELCC_10735 186312 186830 1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S2
7 group_40 EHELCC_16725 4562 5041 1 Hcp family type VI secretion system effector Morganella morganii S2
8 group_2487 NLDBIP_03280 640123 640602 1 Type VI secretion system tube protein Hcp Morganella morganii S4
9 group_40 NLDBIP_03450 679099 679578 1 Hcp family type VI secretion system effector Morganella morganii S4
10 group_126 NLDBIP_11080 164583 165101 1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S4
11 group_40 NLDBIP_17725 50725 51204 -1 Hcp family type VI secretion system effector Morganella morganii S4
12 group_2487 LHKJJB_04795 247364 247843 1 Type VI secretion system tube protein Hcp Morganella morganii S3
13 group_126 LHKJJB_10275 26427 26945 -1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S3
14 group_40 LHKJJB_17645 50725 51204 -1 Hcp family type VI secretion system effector Morganella morganii S3
15 group_40 LHKJJB_19860 335 814 1 Hcp family type VI secretion system effector Morganella morganii S3
16 group_40 HKOGLL_02080 763 1242 -1 Hcp family type VI secretion system effector Morganella morganii S5
17 group_2487 HKOGLL_02250 39739 40218 -1 Type VI secretion system tube protein Hcp Morganella morganii S5
18 group_126 HKOGLL_16440 26436 26954 -1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S5
19 group_40 HKOGLL_17460 50725 51204 -1 Hcp family type VI secretion system effector Morganella morganii S5
20 group_3816 F4V73_RS00085 22000 22518 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
21 group_126 F4V73_RS05140 1097166 1097684 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
22 group_4680 F4V73_RS07030 1460007 1460525 -1 type VI secretion system tube protein Hcp Morganella psychrotolerans
23 group_3816 F4V73_RS09355 1968826 1969311 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
24 group_126 F4V73_RS16845 197547 198038 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
25 group_40 F4V73_RS17415 114260 114739 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
26 group_40 F4V73_RS18725 13478 13957 1 Hcp family type VI secretion system effector Morganella psychrotolerans
27 group_126 PMI_RS00995 245183 245701 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
28 group_40 PMI_RS03605 807789 808262 -1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
29 group_126 PMI_RS03690 831710 832228 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
30 group_126 PMI_RS05420 1185979 1186497 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
31 group_2487 PMI_RS13890 3086170 3086649 -1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
32 group_126 PMI_RS14785 3278930 3279448 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320