Orthogroup:group_40


Homologs in group_40

Help

14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01175 FBDBKF_01175 Morganella morganii S1 glnB nitrogen regulatory protein P-II
FBDBKF_15935 FBDBKF_15935 Morganella morganii S1 glnK Nitrogen regulatory protein PII
EHELCC_00370 EHELCC_00370 Morganella morganii S2 glnB nitrogen regulatory protein P-II
EHELCC_18535 EHELCC_18535 Morganella morganii S2 glnK Nitrogen regulatory protein PII
NLDBIP_03090 NLDBIP_03090 Morganella morganii S4 glnB nitrogen regulatory protein P-II
NLDBIP_17370 NLDBIP_17370 Morganella morganii S4 glnK Nitrogen regulatory protein PII
LHKJJB_04605 LHKJJB_04605 Morganella morganii S3 glnB nitrogen regulatory protein P-II
LHKJJB_17290 LHKJJB_17290 Morganella morganii S3 glnK Nitrogen regulatory protein PII
HKOGLL_02440 HKOGLL_02440 Morganella morganii S5 glnB nitrogen regulatory protein P-II
HKOGLL_17105 HKOGLL_17105 Morganella morganii S5 glnK Nitrogen regulatory protein PII
F4V73_RS07245 F4V73_RS07245 Morganella psychrotolerans glnB nitrogen regulatory protein P-II
F4V73_RS16375 F4V73_RS16375 Morganella psychrotolerans - P-II family nitrogen regulator
PMI_RS00610 PMI_RS00610 Proteus mirabilis HI4320 - P-II family nitrogen regulator
PMI_RS09230 PMI_RS09230 Proteus mirabilis HI4320 glnB nitrogen regulatory protein P-II

Distribution of group_40 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_40 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_40

Orthogroup content: 14 members

Help

This page summarizes the annotation of all members of the orthologous group group_40.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glnB 7
2 glnK 5
3 - 2

Product

# Product Occurence
1 nitrogen regulatory protein P-II 7
2 Nitrogen regulatory protein PII 5
3 P-II family nitrogen regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0347 14 TE Signal transduction mechanisms (T)
Amino acid transport and metabolism (E)		 Nitrogen regulatory protein PII

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04751 7 nitrogen regulatory protein P-II 1 Two-component system -
K04752 7 nitrogen regulatory protein P-II 2 - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00543 14 Nitrogen regulatory protein P-II

Annotations of the 61 SwissProt hits

Annotation Number of occurrences
Nitrogen fixation nifHD region GlnB-like protein 1 3
Nitrogen fixation nifHD region GlnB-like protein 2 3
Nitrogen fixation nifHD region glnB-like protein 1 2
Nitrogen fixation nifHD region glnB-like protein 2 2
Nitrogen fixation nifHD1 region GlnB-like protein 1 1
Nitrogen fixation nifHD1 region GlnB-like protein 2 1
Nitrogen fixation nifHD2 region GlnB-like protein 1 1
Nitrogen fixation nifHD2 region GlnB-like protein 2 1
Nitrogen regulatory PII-like protein 1
Nitrogen regulatory protein GlnK 4
Nitrogen regulatory protein GlnK1 4
Nitrogen regulatory protein GlnK2 3
Nitrogen regulatory protein GlnK3 1
Nitrogen regulatory protein P-II 24
Nitrogen regulatory protein P-II 1 7
Nitrogen regulatory protein P-II 2 1
Nitrogen regulatory protein P-II homolog 2

Protein length

Unique protein length 112

Protein length distribution