PF01380

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF01380
Protein list: lists the 50 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF01380
Description SIS domain

Occurence in the database

PF01380 is associated with 50 different proteins
The 50 proteins are classified into 7 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_715 FBDBKF_02105 109969 110817 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
1 group_802 FBDBKF_03225 47214 48182 1 kdsD arabinose-5-phosphate isomerase KdsD Morganella morganii S1
2 group_872 FBDBKF_03795 163144 163884 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
3 group_974 FBDBKF_04780 157542 158711 1 agaS Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain Morganella morganii S1
4 group_1736 FBDBKF_11805 12398 13258 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
5 group_353 FBDBKF_14940 1255 2142 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
6 group_2114 FBDBKF_15510 27299 29128 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S1
7 group_715 EHELCC_02575 497789 498637 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
8 group_974 EHELCC_06070 216999 218168 1 agaS Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain Morganella morganii S2
9 group_872 EHELCC_06740 83219 83959 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
10 group_802 EHELCC_07310 198921 199889 -1 kdsD arabinose-5-phosphate isomerase KdsD Morganella morganii S2
11 group_353 EHELCC_11305 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
12 group_1736 EHELCC_14500 121447 122307 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
13 group_2114 EHELCC_15870 26599 28428 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S2
14 group_715 NLDBIP_00885 181499 182347 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
15 group_974 NLDBIP_06390 258064 259233 1 agaS Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain Morganella morganii S4
16 group_872 NLDBIP_07065 83092 83832 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
17 group_802 NLDBIP_07635 198794 199762 -1 kdsD arabinose-5-phosphate isomerase KdsD Morganella morganii S4
18 group_353 NLDBIP_11650 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
19 group_1736 NLDBIP_15595 125384 126244 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
20 group_2114 NLDBIP_16500 52235 54064 -1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S4
21 group_715 LHKJJB_01150 210338 211186 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
22 group_974 LHKJJB_03270 235588 236757 1 agaS Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain Morganella morganii S3
23 group_872 LHKJJB_06600 46838 47578 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
24 group_802 LHKJJB_07170 162540 163508 -1 kdsD arabinose-5-phosphate isomerase KdsD Morganella morganii S3
25 group_353 LHKJJB_11510 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
26 group_1736 LHKJJB_15015 12398 13258 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
27 group_2114 LHKJJB_16305 26599 28428 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S3
28 group_715 HKOGLL_01190 215849 216697 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
29 group_802 HKOGLL_03760 69879 70847 1 kdsD arabinose-5-phosphate isomerase KdsD Morganella morganii S5
30 group_872 HKOGLL_04330 185809 186549 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
31 group_974 HKOGLL_06745 157452 158621 1 agaS Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain Morganella morganii S5
32 group_353 HKOGLL_10120 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
33 group_2114 HKOGLL_16075 26599 28428 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S5
34 group_1736 HKOGLL_19270 93 953 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
35 group_715 F4V73_RS04470 946159 947007 -1 MurR/RpiR family transcriptional regulator Morganella psychrotolerans
36 group_974 F4V73_RS09250 1937161 1938330 1 SIS domain-containing protein Morganella psychrotolerans
37 group_872 F4V73_RS11075 352680 353420 1 MurR/RpiR family transcriptional regulator Morganella psychrotolerans
38 group_802 F4V73_RS11695 488464 489432 -1 kdsD arabinose-5-phosphate isomerase KdsD Morganella psychrotolerans
39 group_1736 F4V73_RS14850 204955 205815 1 SIS domain-containing protein Morganella psychrotolerans
40 group_2114 F4V73_RS17635 167874 169703 -1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella psychrotolerans
41 group_715 PMI_RS05580 1217377 1218219 -1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
42 group_353 PMI_RS10455 2296223 2297047 1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
43 group_974 PMI_RS10540 2317641 2318831 -1 SIS domain-containing protein Proteus mirabilis HI4320
44 group_1736 PMI_RS13900 3088577 3089437 -1 SIS domain-containing protein Proteus mirabilis HI4320
45 group_353 PMI_RS14705 3260727 3261614 -1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
46 group_872 PMI_RS14750 3273031 3273771 -1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
47 group_2114 PMI_RS15190 3370027 3371853 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Proteus mirabilis HI4320
48 group_353 PMI_RS17480 3836649 3837500 1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
49 group_802 PMI_RS18175 3989248 3990234 -1 kdsD arabinose-5-phosphate isomerase KdsD Proteus mirabilis HI4320