Homologs in group_197

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11805 FBDBKF_11805 24.5 Morganella morganii S1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
EHELCC_14500 EHELCC_14500 24.5 Morganella morganii S2 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
NLDBIP_15595 NLDBIP_15595 24.5 Morganella morganii S4 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
LHKJJB_15015 LHKJJB_15015 24.5 Morganella morganii S3 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
HKOGLL_19270 HKOGLL_19270 24.5 Morganella morganii S5 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
F4V73_RS14850 F4V73_RS14850 25.5 Morganella psychrotolerans - SIS domain-containing protein
PMI_RS10455 PMI_RS10455 23.1 Proteus mirabilis HI4320 - MurR/RpiR family transcriptional regulator
PMI_RS13900 PMI_RS13900 27.7 Proteus mirabilis HI4320 - SIS domain-containing protein

Distribution of the homologs in the orthogroup group_197

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_197

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46117 7.84e-131 375 66 1 280 4 None Uncharacterized HTH-type transcriptional regulator in aarA 3'region Providencia stuartii
Q97MK5 3.92e-38 138 30 2 243 4 CA_C0191 Uncharacterized HTH-type transcriptional regulator CA_C0191 Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q8RD36 1.79e-31 121 31 2 241 4 TTE0211 Uncharacterized HTH-type transcriptional regulator TTE0211 Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P26833 6.79e-29 114 25 1 251 4 CPE0189 Uncharacterized HTH-type transcriptional regulator CPE0189 Clostridium perfringens (strain 13 / Type A)
P44540 8.82e-27 108 29 2 241 4 HI_0143 Uncharacterized HTH-type transcriptional regulator HI_0143 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q32DC7 1.5e-26 108 26 1 260 3 murR HTH-type transcriptional regulator MurR Shigella dysenteriae serotype 1 (strain Sd197)
B1LMM1 1.69e-26 108 26 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain SMS-3-5 / SECEC)
A8A2S4 4.24e-26 107 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli O9:H4 (strain HS)
B7NPW3 6.28e-26 106 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
C6UQ16 1.51e-25 105 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli O157:H7 (strain TW14359 / EHEC)
B5YZX2 1.51e-25 105 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XBJ3 1.51e-25 105 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli O157:H7
Q3YZB5 2e-25 105 25 1 260 3 murR HTH-type transcriptional regulator MurR Shigella sonnei (strain Ss046)
B7N617 2.04e-25 105 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q0T281 2.05e-25 104 25 1 254 3 murR HTH-type transcriptional regulator MurR Shigella flexneri serotype 5b (strain 8401)
B7LKK8 3.39e-25 104 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q31Y52 4.34e-25 104 25 1 248 3 murR HTH-type transcriptional regulator MurR Shigella boydii serotype 4 (strain Sb227)
P77245 5.8e-25 103 26 1 248 1 murR HTH-type transcriptional regulator MurR Escherichia coli (strain K12)
B1XA98 5.8e-25 103 26 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain K12 / DH10B)
C4ZVV8 5.8e-25 103 26 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain K12 / MC4100 / BW2952)
Q83K75 5.9e-25 103 25 1 254 3 murR HTH-type transcriptional regulator MurR Shigella flexneri
B1IX45 1.06e-24 103 25 1 260 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B2TX16 1.07e-24 103 25 1 248 3 murR HTH-type transcriptional regulator MurR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I503 1.3e-24 103 25 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain SE11)
B7M6T6 1.3e-24 103 25 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli O8 (strain IAI1)
A7ZPM7 1.3e-24 103 25 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli O139:H28 (strain E24377A / ETEC)
B7LCH1 3.6e-24 102 25 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain 55989 / EAEC)
C6UMS6 2.13e-23 99 25 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain B / REL606)
C5W7D8 2.13e-23 99 25 1 248 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain B / BL21-DE3)
A8ADG3 8e-22 95 25 2 248 3 murR HTH-type transcriptional regulator MurR Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q9WYG1 1.35e-21 94 29 2 239 4 TM_0326 Uncharacterized HTH-type transcriptional regulator TM_0326 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P37767 5.43e-21 93 27 4 255 4 yfhH Uncharacterized HTH-type transcriptional regulator YfhH Escherichia coli (strain K12)
A9MIE1 6.07e-21 93 23 2 260 3 murR HTH-type transcriptional regulator MurR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q45581 5.53e-20 90 25 4 255 1 ybbH Uncharacterized HTH-type transcriptional regulator YbbH Bacillus subtilis (strain 168)
P46118 9.6e-19 87 27 7 259 3 hexR HTH-type transcriptional regulator HexR Escherichia coli (strain K12)
Q88P32 2.19e-17 83 29 5 250 1 hexR HTH-type transcriptional regulator HexR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
O68281 1.12e-15 78 30 5 240 3 hexR HTH-type transcriptional regulator HexR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q2SYA5 4.11e-15 78 26 5 264 3 glk Bifunctional protein glk Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
P0ACS7 4.28e-15 77 21 3 252 1 rpiR HTH-type transcriptional regulator RpiR Escherichia coli (strain K12)
P0ACS8 4.28e-15 77 21 3 252 3 rpiR HTH-type transcriptional regulator RpiR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q3JPP0 4.47e-15 78 26 5 264 3 glk Bifunctional protein glk Burkholderia pseudomallei (strain 1710b)
Q63RQ7 4.86e-15 78 26 5 264 3 glk Bifunctional protein glk Burkholderia pseudomallei (strain K96243)
Q143F8 5.58e-15 78 26 5 264 3 glk Bifunctional protein glk Paraburkholderia xenovorans (strain LB400)
Q1BYA7 6.31e-15 78 26 5 264 3 glk Bifunctional protein glk Burkholderia orbicola (strain AU 1054)
Q39IQ1 7.13e-15 77 26 5 264 3 glk Bifunctional protein glk Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
Q62HW8 7.97e-15 77 26 5 264 3 glk Bifunctional protein glk Burkholderia mallei (strain ATCC 23344)
P54717 1.07e-06 52 21 4 205 2 glvR HTH-type transcriptional regulator GlvR Bacillus subtilis (strain 168)
Q4J6D9 0.000562 44 26 3 141 3 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17480
Feature type CDS
Gene -
Product MurR/RpiR family transcriptional regulator
Location 3836649 - 3837500 (strand: 1)
Length 852 (nucleotides) / 283 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_197
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF01380 SIS domain
PF01418 Helix-turn-helix domain, rpiR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1737 Transcription (K) K DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains

Protein Sequence

MSTLTKKLENLRLQGKGTEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSRQMGYGGYPEFKIDYLSEEKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIALLDAATIDLLAEKMISAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSANLSADDLAIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQHSQLGVITPQVLQMVAFDVLFFKYMTLAKGSAEKALLKGRQAVMQGNQ

Flanking regions ( +/- flanking 50bp)

TACCGATCCAGAAAAATAAGTCAGAAGAAGAAAAGAAAAAGGATAATAGAATGTCAACACTGACTAAGAAACTTGAAAATTTGCGCTTACAAGGCAAAGGGACAGAGCAACGTCTCGCCCACTATTTATTAGAAAATAGCGATAATATTGCCAGTATGAATGCCGCAGAATTGGCACAAAAAGCCGGTGTCAGTAGTGCTTCTGTTATCCGTTTTTCCCGCCAAATGGGGTATGGCGGTTATCCTGAATTTAAAATTGATTATCTCTCAGAGGAAAAACAACAAAAAAGCAGTAGTGATATTCTTTATGCCAATTTAGCCAAAACAGACTCGACTGAGCAGATTATTGCTAAAACAGGACATCTATTTACTACCGCCATTCAGGATTCGATAGCGTTACTGGATGCGGCGACGATAGATTTACTCGCTGAGAAAATGATCAGCGCTAAACGGATCGTTTTATTTGGTGTGGGCGCATCTGCGATCGTTGCGAGCGATATCTTCCATAAACTGATCCGAGTGAATAAAAACACCTTATTTAGTGCAGATCTCCATGCGCAACTTGCTTATTCAGCGAATTTATCCGCGGATGATTTGGCGATTGCTGTTACTGCAAGAGGCAATACTGCGGATATTAATCGAATGCTGAAAGCGGCAAAACAAGAAGGCTGTATCACAGTGGCTTTAACACGTTTTGGGCAAGATGAAGCTACGCGCTTAGCGAATTACACATTACCTTATTTTTATGATGAGCAACATTCACAATTGGGGGTGATCACACCGCAAGTATTGCAAATGGTCGCTTTTGATGTGCTGTTTTTTAAATATATGACACTGGCAAAAGGCTCAGCGGAAAAAGCGCTATTAAAAGGGCGACAAGCTGTAATGCAAGGAAATCAATAATGTTATTTATCACCATATTAGCTGTTGGTGCGGCGATTGGCTTAATTATT