Orthogroup:group_872


Homologs in group_872

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04425 FBDBKF_04425 Morganella morganii S1 leuD 3-isopropylmalate dehydratase small subunit
EHELCC_05715 EHELCC_05715 Morganella morganii S2 leuD 3-isopropylmalate dehydratase small subunit
NLDBIP_06035 NLDBIP_06035 Morganella morganii S4 leuD 3-isopropylmalate dehydratase small subunit
LHKJJB_02915 LHKJJB_02915 Morganella morganii S3 leuD 3-isopropylmalate dehydratase small subunit
HKOGLL_06390 HKOGLL_06390 Morganella morganii S5 leuD 3-isopropylmalate dehydratase small subunit
F4V73_RS08870 F4V73_RS08870 Morganella psychrotolerans leuD 3-isopropylmalate dehydratase small subunit
PMI_RS10280 PMI_RS10280 Proteus mirabilis HI4320 leuD 3-isopropylmalate dehydratase small subunit

Distribution of group_872 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_872 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_872

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_872.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 leuD 7

Product

# Product Occurence
1 3-isopropylmalate dehydratase small subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0066 7 E Amino acid transport and metabolism (E) 3-isopropylmalate dehydratase small subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00694 7 Aconitase C-terminal domain

Annotations of the 505 SwissProt hits

Annotation Number of occurrences
2,3-dimethylmalate dehydratase small subunit 1
3-isopropylmalate dehydratase 8
3-isopropylmalate dehydratase small subunit 465
3-isopropylmalate dehydratase small subunit (Fragment) 3
3-isopropylmalate dehydratase small subunit 1 10
3-isopropylmalate dehydratase small subunit 2 10
Aconitase AMT8 1
Isopropylmalate/citramalate isomerase small subunit 1
Methanogen homoaconitase small subunit 3
Methanogen homoaconitase small subunit 1 1
Methanogen homoaconitase small subunit 2 1
Putative 3-isopropylmalate dehydratase small subunit 1

Protein length

Unique protein length 200

Protein length distribution