Homologs in group_197

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11805 FBDBKF_11805 60.5 Morganella morganii S1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
EHELCC_14500 EHELCC_14500 60.5 Morganella morganii S2 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
NLDBIP_15595 NLDBIP_15595 60.5 Morganella morganii S4 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
LHKJJB_15015 LHKJJB_15015 60.5 Morganella morganii S3 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
HKOGLL_19270 HKOGLL_19270 60.5 Morganella morganii S5 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
F4V73_RS14850 F4V73_RS14850 59.8 Morganella psychrotolerans - SIS domain-containing protein
PMI_RS10455 PMI_RS10455 20.1 Proteus mirabilis HI4320 - MurR/RpiR family transcriptional regulator
PMI_RS17480 PMI_RS17480 27.7 Proteus mirabilis HI4320 - MurR/RpiR family transcriptional regulator

Distribution of the homologs in the orthogroup group_197

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_197

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A8ADG3 4.72e-78 241 44 0 284 3 murR HTH-type transcriptional regulator MurR Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B7NPW3 8.52e-76 235 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
A9MIE1 1.67e-75 235 42 0 285 3 murR HTH-type transcriptional regulator MurR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B7N617 4.64e-75 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1LMM1 5.34e-75 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain SMS-3-5 / SECEC)
B1IX45 5.34e-75 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P77245 6.86e-75 233 42 2 287 1 murR HTH-type transcriptional regulator MurR Escherichia coli (strain K12)
B1XA98 6.86e-75 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain K12 / DH10B)
C4ZVV8 6.86e-75 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain K12 / MC4100 / BW2952)
B7LCH1 8.81e-75 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain 55989 / EAEC)
B2TX16 9.92e-75 233 44 2 270 3 murR HTH-type transcriptional regulator MurR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I503 1.12e-74 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain SE11)
B7M6T6 1.12e-74 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O8 (strain IAI1)
A7ZPM7 1.12e-74 233 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q32DC7 1.37e-74 232 42 2 287 3 murR HTH-type transcriptional regulator MurR Shigella dysenteriae serotype 1 (strain Sd197)
B7LKK8 2.17e-74 232 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
C6UMS6 2.52e-74 232 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain B / REL606)
C5W7D8 2.52e-74 232 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli (strain B / BL21-DE3)
Q0T281 3.91e-74 231 44 2 267 3 murR HTH-type transcriptional regulator MurR Shigella flexneri serotype 5b (strain 8401)
Q31Y52 6.64e-74 231 43 2 270 3 murR HTH-type transcriptional regulator MurR Shigella boydii serotype 4 (strain Sb227)
A8A2S4 7.08e-74 231 42 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O9:H4 (strain HS)
Q3YZB5 8.43e-74 230 42 2 287 3 murR HTH-type transcriptional regulator MurR Shigella sonnei (strain Ss046)
Q83K75 8.73e-74 229 43 2 267 3 murR HTH-type transcriptional regulator MurR Shigella flexneri
C6UQ16 8.32e-73 228 41 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O157:H7 (strain TW14359 / EHEC)
B5YZX2 8.32e-73 228 41 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XBJ3 8.32e-73 228 41 2 287 3 murR HTH-type transcriptional regulator MurR Escherichia coli O157:H7
P37767 1.31e-59 194 39 1 284 4 yfhH Uncharacterized HTH-type transcriptional regulator YfhH Escherichia coli (strain K12)
Q8RD36 7.05e-39 140 32 1 250 4 TTE0211 Uncharacterized HTH-type transcriptional regulator TTE0211 Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P44540 6.96e-38 138 31 2 269 4 HI_0143 Uncharacterized HTH-type transcriptional regulator HI_0143 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P26833 9.28e-35 129 28 2 266 4 CPE0189 Uncharacterized HTH-type transcriptional regulator CPE0189 Clostridium perfringens (strain 13 / Type A)
Q97MK5 5.96e-33 125 30 2 272 4 CA_C0191 Uncharacterized HTH-type transcriptional regulator CA_C0191 Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q45581 2.39e-32 123 28 2 282 1 ybbH Uncharacterized HTH-type transcriptional regulator YbbH Bacillus subtilis (strain 168)
Q9WYG1 9.1e-28 111 30 3 254 4 TM_0326 Uncharacterized HTH-type transcriptional regulator TM_0326 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P0ACS7 3.28e-27 110 26 1 258 1 rpiR HTH-type transcriptional regulator RpiR Escherichia coli (strain K12)
P0ACS8 3.28e-27 110 26 1 258 3 rpiR HTH-type transcriptional regulator RpiR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q62HW8 1.34e-25 109 27 4 263 3 glk Bifunctional protein glk Burkholderia mallei (strain ATCC 23344)
Q2SYA5 1.49e-25 109 27 4 265 3 glk Bifunctional protein glk Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
Q63RQ7 1.52e-25 109 27 4 265 3 glk Bifunctional protein glk Burkholderia pseudomallei (strain K96243)
Q3JPP0 1.59e-25 109 27 4 263 3 glk Bifunctional protein glk Burkholderia pseudomallei (strain 1710b)
P46117 5.45e-25 103 26 4 271 4 None Uncharacterized HTH-type transcriptional regulator in aarA 3'region Providencia stuartii
Q143F8 1.06e-24 107 26 4 265 3 glk Bifunctional protein glk Paraburkholderia xenovorans (strain LB400)
Q1BYA7 1.28e-24 106 26 4 265 3 glk Bifunctional protein glk Burkholderia orbicola (strain AU 1054)
Q39IQ1 1.43e-24 106 26 4 263 3 glk Bifunctional protein glk Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
Q88P32 3.76e-20 90 23 2 249 1 hexR HTH-type transcriptional regulator HexR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
O68281 1.39e-16 81 22 2 249 3 hexR HTH-type transcriptional regulator HexR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9LBW5 6.26e-10 60 32 1 121 2 rmpB 3-hexulose-6-phosphate isomerase Mycobacterium gastri
O28478 3.13e-09 58 26 2 155 1 AF_1796 Uncharacterized protein AF_1796 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P42502 1.32e-08 58 29 4 169 3 kpsF Arabinose 5-phosphate isomerase KpsF Escherichia coli
Q47334 1.8e-08 58 29 4 169 3 kpsF Arabinose 5-phosphate isomerase KpsF Escherichia coli
Q8FDQ2 2.47e-08 57 29 4 169 1 kpsF Arabinose 5-phosphate isomerase KpsF Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P45313 2.64e-07 54 34 1 109 3 HI_1678 Probable arabinose 5-phosphate isomerase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9YAK0 6.75e-07 52 27 2 123 3 APE_1940.1 Uncharacterized protein APE_1940.1 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
P54717 9.25e-07 52 26 7 214 2 glvR HTH-type transcriptional regulator GlvR Bacillus subtilis (strain 168)
O26351 2.18e-06 50 27 2 129 3 MTH_249 Uncharacterized protein MTH_249 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q8ZLS1 3.55e-06 51 25 1 159 3 kdsD Arabinose 5-phosphate isomerase KdsD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z3G6 3.71e-06 51 25 1 159 3 kdsD Arabinose 5-phosphate isomerase KdsD Salmonella typhi
Q9S0X3 5.3e-06 49 33 3 111 1 rmpB 3-hexulose-6-phosphate isomerase Methylomonas aminofaciens
Q83JF4 5.4e-06 50 27 2 143 3 kdsD Arabinose 5-phosphate isomerase KdsD Shigella flexneri
P45395 6.71e-06 50 27 2 143 1 kdsD Arabinose 5-phosphate isomerase KdsD Escherichia coli (strain K12)
Q8X9J0 1.12e-05 49 27 2 143 3 kdsD Arabinose 5-phosphate isomerase KdsD Escherichia coli O157:H7
O84404 1.24e-05 49 23 3 169 3 CT_399 Uncharacterized protein CT_399 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q8FD73 1.28e-05 49 27 2 143 3 kdsD Arabinose 5-phosphate isomerase KdsD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q9Z826 2.49e-05 48 28 1 127 3 CPn_0526 Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547 Chlamydia pneumoniae
Q8Z4C7 2.77e-05 48 27 3 147 3 gutQ Arabinose 5-phosphate isomerase GutQ Salmonella typhi
Q8ZMJ9 6.33e-05 47 27 3 147 3 gutQ Arabinose 5-phosphate isomerase GutQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O67500 8.18e-05 47 26 2 146 3 aq_1546 Uncharacterized phosphosugar isomerase aq_1546 Aquifex aeolicus (strain VF5)
Q83MK2 0.000124 46 27 3 137 3 gutQ Arabinose 5-phosphate isomerase GutQ Shigella flexneri
P17115 0.000124 46 27 3 137 1 gutQ Arabinose 5-phosphate isomerase GutQ Escherichia coli (strain K12)
Q8X4S5 0.000124 46 27 3 137 3 gutQ Arabinose 5-phosphate isomerase GutQ Escherichia coli O157:H7
Q8FEN7 0.000132 46 27 3 147 3 gutQ Arabinose 5-phosphate isomerase GutQ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
F9VPA4 0.000177 46 30 5 152 1 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q890U2 0.000206 46 29 3 137 3 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Clostridium tetani (strain Massachusetts / E88)
Q97MN6 0.000437 45 27 3 137 3 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q5JH71 0.000889 44 26 5 182 3 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q9HVW0 0.001 43 25 2 143 1 kdsD Arabinose 5-phosphate isomerase KdsD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13900
Feature type CDS
Gene -
Product SIS domain-containing protein
Location 3088577 - 3089437 (strand: -1)
Length 861 (nucleotides) / 286 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_197
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF01380 SIS domain
PF01418 Helix-turn-helix domain, rpiR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1737 Transcription (K) K DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15835 RpiR family transcriptional regulator, murPQ operon repressor - -

Protein Sequence

MPTLTKIAWIKPGMATNQRKIADYILEHPEKIVTLSSQQLAEIMGVSQSAIVKFSQKIGFKGFPSLKLAISEDLGRKNANSEKNSSILHNQIDSEDSLVVIAQKLAQEKNNSIRDTTRQINYHQFEQVIQQIDDASRVQIIGIGGSGLVARDLSYKLQKIGITTLIETDHHVQISVAQMLSPRDLQIVISYSGKRKDMLVAASVAKKQGAKIIAITGEKHSPLGLMADYILETIADEGEWRSAAISSRTAQNTITDLIFMALLKKRDENAKALVLSSQALINSLDD

Flanking regions ( +/- flanking 50bp)

AATAATTAAATCATTATAAAAATAGTATAATTTAAGTGGATTATGTCATTATGCCTACATTAACGAAGATAGCGTGGATAAAACCAGGGATGGCGACAAATCAACGTAAAATAGCGGATTATATTTTAGAACACCCTGAAAAAATCGTGACTTTATCATCACAGCAATTAGCCGAAATTATGGGAGTCAGCCAATCAGCAATAGTGAAATTTAGTCAAAAGATAGGATTTAAAGGATTTCCTTCTTTAAAGCTGGCTATCAGTGAAGATTTAGGCCGAAAAAATGCTAATTCAGAAAAAAACTCCAGCATATTACATAACCAAATAGACTCAGAGGATAGCCTGGTTGTTATTGCGCAGAAATTAGCACAAGAAAAAAATAATTCAATTCGGGATACCACACGTCAAATTAATTATCACCAGTTTGAACAAGTGATCCAACAGATTGATGACGCCTCTCGGGTACAAATTATAGGTATTGGTGGATCAGGTTTAGTTGCCAGAGATTTAAGTTATAAATTACAGAAAATAGGTATTACGACTTTAATTGAAACTGATCACCATGTACAAATTTCTGTTGCTCAGATGTTAAGCCCTCGGGATTTACAAATTGTGATCTCTTACAGTGGCAAAAGAAAAGATATGCTGGTCGCTGCATCTGTGGCTAAAAAACAAGGTGCTAAAATTATAGCGATCACAGGAGAAAAACATTCACCACTAGGTCTGATGGCCGATTATATATTAGAAACTATTGCTGATGAAGGTGAGTGGCGTAGTGCTGCTATTTCTTCTCGCACTGCACAAAACACCATTACCGATCTTATCTTTATGGCATTATTAAAGAAGCGTGATGAAAATGCGAAGGCTTTAGTATTAAGCTCTCAAGCACTAATTAATAGTCTGGATGATTAATTTATTTGAACTGATTCAAATTTTTAATATTTAAAAGTTAATATTTATAC