PF01266


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01266, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 38 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01266
Description FAD dependent oxidoreductase

Occurence in the database

PF01266 is associated with 38 different proteins (see tab "Protein list" and "Profile")
The 38 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_149 FBDBKF_02620 222170 223594 -1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S1
1 group_777 FBDBKF_03595 123448 125094 -1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S1
2 group_988 FBDBKF_05465 103061 104359 -1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S1
3 group_1619 FBDBKF_10680 103838 105325 -1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S1
4 group_1923 FBDBKF_14305 61183 63288 1 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Morganella morganii S1
5 group_149 EHELCC_03090 609990 611414 -1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S2
6 group_777 EHELCC_06940 122009 123655 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S2
7 group_1923 EHELCC_07975 53697 55802 -1 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Morganella morganii S2
8 group_988 EHELCC_12125 77135 78433 1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S2
9 group_1619 EHELCC_15015 103828 105315 -1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S2
10 group_149 NLDBIP_00370 68722 70146 1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S4
11 group_777 NLDBIP_07265 121882 123528 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S4
12 group_1923 NLDBIP_08300 53697 55802 -1 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Morganella morganii S4
13 group_988 NLDBIP_12465 77090 78388 1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S4
14 group_1619 NLDBIP_14845 103828 105315 -1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S4
15 group_149 LHKJJB_01665 322539 323963 -1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S3
16 group_1923 LHKJJB_05965 201357 203462 1 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Morganella morganii S3
17 group_777 LHKJJB_06800 85628 87274 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S3
18 group_988 LHKJJB_12325 77135 78433 1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S3
19 group_1619 LHKJJB_14500 36411 37898 1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S3
20 group_149 HKOGLL_01705 328050 329474 -1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S5
21 group_777 HKOGLL_04130 146113 147759 -1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella morganii S5
22 group_1923 HKOGLL_04950 38288 40393 -1 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Morganella morganii S5
23 group_988 HKOGLL_10940 77135 78433 1 dadA Glycine/D-amino acid oxidase (deaminating) Morganella morganii S5
24 group_1619 HKOGLL_13120 36411 37898 1 glpD glycerol-3-phosphate dehydrogenase Morganella morganii S5
25 group_1923 F4V73_RS02600 547143 549155 -1 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Morganella psychrotolerans
26 group_988 F4V73_RS03830 810453 811751 1 D-amino acid dehydrogenase Morganella psychrotolerans
27 group_149 F4V73_RS05080 1082251 1083675 -1 FAD-binding oxidoreductase Morganella psychrotolerans
28 group_777 F4V73_RS11275 395836 397482 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Morganella psychrotolerans
29 group_1619 F4V73_RS14395 106995 108482 -1 glpD glycerol-3-phosphate dehydrogenase Morganella psychrotolerans
30 group_4414 PMI_RS05120 1117864 1119066 -1 lhgO L-2-hydroxyglutarate oxidase Proteus mirabilis HI4320
31 group_988 PMI_RS07315 1602359 1603663 -1 D-amino acid dehydrogenase Proteus mirabilis HI4320
32 group_1923 PMI_RS08805 1925983 1928022 1 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC Proteus mirabilis HI4320
33 group_149 PMI_RS10590 2329142 2330557 -1 FAD-dependent oxidoreductase Proteus mirabilis HI4320
34 group_149 PMI_RS14000 3107558 3108979 -1 FAD-dependent oxidoreductase Proteus mirabilis HI4320
35 group_1619 PMI_RS14485 3211685 3213178 1 glpD glycerol-3-phosphate dehydrogenase Proteus mirabilis HI4320
36 group_149 PMI_RS15210 3376194 3377321 1 TIGR03364 family FAD-dependent oxidoreductase Proteus mirabilis HI4320
37 group_777 PMI_RS17870 3925455 3927113 1 glpA anaerobic glycerol-3-phosphate dehydrogenase subunit A Proteus mirabilis HI4320