Homologs in group_4414
0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product |
|---|
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| B7N6P4 | 9.64e-128 | 377 | 47 | 1 | 389 | 3 | ygaF | L-2-hydroxyglutarate dehydrogenase | Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) |
| P37339 | 3.31e-126 | 373 | 46 | 1 | 389 | 1 | lhgD | L-2-hydroxyglutarate dehydrogenase | Escherichia coli (strain K12) |
| A0A5Y6MCT2 | 4.34e-126 | 373 | 46 | 1 | 389 | 3 | lhgO | L-2-hydroxyglutarate dehydrogenase | Salmonella houtenae |
| S2DJ52 | 1.05e-118 | 353 | 46 | 2 | 374 | 1 | A33Q_0852 | L-2-hydroxyglutarate dehydrogenase | Indibacter alkaliphilus (strain CCUG 57479 / KCTC 22604 / LW1) |
| A7SMW7 | 2.89e-112 | 339 | 43 | 4 | 407 | 3 | v1g172254 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Nematostella vectensis |
| Q9N4Z0 | 1.72e-107 | 326 | 44 | 3 | 401 | 3 | Y45G12B.3 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Caenorhabditis elegans |
| A8X2R1 | 4.64e-107 | 325 | 43 | 4 | 402 | 3 | CBG06643 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Caenorhabditis briggsae |
| Q9H9P8 | 4.48e-104 | 318 | 42 | 3 | 412 | 1 | L2HGDH | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Homo sapiens |
| Q91YP0 | 3.53e-103 | 316 | 41 | 3 | 396 | 1 | L2hgdh | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Mus musculus |
| A7MBI3 | 1.02e-102 | 315 | 41 | 3 | 412 | 2 | L2HGDH | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Bos taurus |
| Q55GI5 | 1.55e-96 | 298 | 38 | 5 | 408 | 3 | l2hgdh | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Dictyostelium discoideum |
| Q5R9N7 | 6.63e-92 | 285 | 39 | 4 | 412 | 2 | L2HGDH | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Pongo abelii |
| A0A0R3K2G2 | 3.63e-32 | 130 | 30 | 7 | 272 | 1 | lhgO_1 | Glycerol 3-phosphate dehydrogenase | Caloramator mitchellensis |
| Q9LES4 | 3.55e-31 | 127 | 27 | 13 | 429 | 1 | L2HGDH | L-2-hydroxyglutarate dehydrogenase, mitochondrial | Arabidopsis thaliana |
| A0A011QK89 | 1.95e-30 | 123 | 28 | 8 | 277 | 3 | lhgO_1 | L-2-hydroxyglutarate dehydrogenase | Accumulibacter regalis |
| A0A0M7LBC1 | 9.29e-29 | 118 | 32 | 9 | 289 | 3 | lhgO | L-2-hydroxyglutarate dehydrogenase | Achromobacter aegrifaciens |
| P47285 | 1.27e-22 | 101 | 29 | 11 | 306 | 3 | MG039 | Glycerol 3-phosphate oxidase | Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37) |
| P75063 | 1.95e-19 | 92 | 30 | 11 | 292 | 1 | glpD | Glycerol 3-phosphate oxidase | Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) |
| Q1CV68 | 3.93e-12 | 71 | 24 | 17 | 424 | 3 | mqo | Probable malate:quinone oxidoreductase | Helicobacter pylori (strain HPAG1) |
| O24913 | 5.69e-12 | 70 | 24 | 17 | 424 | 1 | mqo | Malate:quinone oxidoreductase | Helicobacter pylori (strain ATCC 700392 / 26695) |
| B6JPI8 | 6.63e-12 | 70 | 24 | 18 | 424 | 3 | mqo | Probable malate:quinone oxidoreductase | Helicobacter pylori (strain P12) |
| Q9ZMY5 | 1.86e-11 | 68 | 24 | 17 | 424 | 3 | mqo | Malate:quinone oxidoreductase | Helicobacter pylori (strain J99 / ATCC 700824) |
| Q17VT7 | 5.36e-11 | 67 | 24 | 18 | 429 | 3 | mqo | Probable malate:quinone oxidoreductase | Helicobacter acinonychis (strain Sheeba) |
| P56954 | 1.22e-10 | 66 | 23 | 16 | 426 | 3 | mqo | Probable malate:quinone oxidoreductase | Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) |
| B7UP73 | 2.89e-08 | 58 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O127:H6 (strain E2348/69 / EPEC) |
| Q1RD98 | 2.95e-08 | 58 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain UTI89 / UPEC) |
| Q0TJ15 | 2.95e-08 | 58 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O6:K15:H31 (strain 536 / UPEC) |
| A1A9V4 | 2.95e-08 | 58 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O1:K1 / APEC |
| B7MIK0 | 2.95e-08 | 58 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O45:K1 (strain S88 / ExPEC) |
| Q8FIR3 | 3.14e-08 | 58 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) |
| B7NL75 | 3.31e-08 | 58 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O7:K1 (strain IAI39 / ExPEC) |
| Q32ER8 | 4.49e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Shigella dysenteriae serotype 1 (strain Sd197) |
| A7ZKG4 | 4.61e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O139:H28 (strain E24377A / ETEC) |
| B5YVS9 | 4.69e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O157:H7 (strain EC4115 / EHEC) |
| P58523 | 4.69e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O157:H7 |
| P40874 | 4.78e-08 | 58 | 26 | 7 | 214 | 1 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain K12) |
| B1X9H2 | 4.78e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain K12 / DH10B) |
| C4ZRZ9 | 4.78e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain K12 / MC4100 / BW2952) |
| B1IV43 | 5.18e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) |
| A7ZZ17 | 5.18e-08 | 58 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O9:H4 (strain HS) |
| B7NAT4 | 7.41e-08 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) |
| Q3Z357 | 1.11e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Shigella sonnei (strain Ss046) |
| B7MTJ0 | 1.12e-07 | 57 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O81 (strain ED1a) |
| Q83RT9 | 1.14e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Shigella flexneri |
| Q0T5X2 | 1.14e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Shigella flexneri serotype 5b (strain 8401) |
| Q31ZB5 | 1.2e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Shigella boydii serotype 4 (strain Sb227) |
| B2TTL2 | 1.2e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) |
| B6I9D6 | 1.2e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain SE11) |
| B7M934 | 1.2e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli O8 (strain IAI1) |
| B7LFZ3 | 1.2e-07 | 57 | 26 | 7 | 214 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain 55989 / EAEC) |
| B1LIV1 | 3.21e-07 | 55 | 25 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia coli (strain SMS-3-5 / SECEC) |
| P40859 | 3.37e-07 | 55 | 22 | 8 | 255 | 1 | soxA | Monomeric sarcosine oxidase | Bacillus sp. (strain B-0618) |
| A8AI19 | 1.49e-06 | 53 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) |
| Q6D2N1 | 2.1e-05 | 50 | 26 | 4 | 193 | 3 | mnmC | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) |
| B4TSS2 | 2.7e-05 | 49 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Salmonella schwarzengrund (strain CVM19633) |
| A9N5Q2 | 2.77e-05 | 49 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) |
| B4T2Z2 | 2.82e-05 | 49 | 26 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Salmonella newport (strain SL254) |
| B7LT77 | 3.33e-05 | 49 | 24 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) |
| A9MH03 | 5.06e-05 | 48 | 23 | 8 | 247 | 3 | solA | N-methyl-L-tryptophan oxidase | Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) |
| P58525 | 7.95e-05 | 48 | 25 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) |
| P58524 | 8.31e-05 | 48 | 25 | 7 | 211 | 3 | solA | N-methyl-L-tryptophan oxidase | Salmonella typhi |
| Q9AGP8 | 0.000173 | 47 | 23 | 7 | 230 | 1 | dmg | Dimethylglycine oxidase | Arthrobacter globiformis |
| Source | Proteus mirabilis HI4320 |
|---|---|
| Locus tag | PMI_RS05120 |
| Feature type | CDS |
| Gene | lhgO |
| Product | L-2-hydroxyglutarate oxidase |
| Location | 1117864 - 1119066 (strand: -1) |
| Length | 1203 (nucleotides) / 400 (amino acids) |
| Accession | NC_010554 |
|---|---|
| Length | 4063606 nucleotides |
| Topology | circular |
| Plasmid | False |
| Orthogroup | group_4414 | |
|---|---|---|
| Orthogroup size | 1 | |
| N. genomes | 1 |
| PF01266 | FAD dependent oxidoreductase |
|---|
| ID | Function(s) descr. | Function(s) cat. | Description |
|---|---|---|---|
| COG0579 | Carbohydrate transport and metabolism (G) | G | L-2-hydroxyglutarate oxidase LhgO |
| KO | Description | Pathways | Modules |
|---|---|---|---|
| K15736 | (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] | Lysine degradation Metabolic pathways Microbial metabolism in diverse environments |
Lysine degradation, bacteria, L-lysine => succinate Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA |
MGSIMTYDVIIIGAGLVGLGVASALQESQPELKVLVIDKESGPAVHQSGHNSNVVHSGIYYTPGSLKARLAKQGNITTYNFCKQHHLYYDRCGKVIVATDEKELPALENIYQRGIQNGLEVIKMTESELKAREPYVNGIAALLVPDAGIVNYPEIAAKHVEIIQARGGVFAFNQAVNAINETDETVTVTTSTTQFTAKWLINCAGLFSDRVAKMAGYDTGMKIVPFRGEYFMLNSNKNYLVNHLIYPVPNPDFPFLGVHFTRMYNGHRDVGPNAVLAFKREGYKKSDIDLKDLTEVLTYKGFWKIAGNYLGEGMAELRRSYSRKLFAQNAQKLIPALREADIHPGPAGVRAQALTREGKLVDDFHFVKGKRSLHVCNAPSPAATASIEIGREIVREHFLL
AAGTTAAAGCGTTTACAACAAGAAAAAAATTAACTCTTATACTGGATTATATGGGTAGTATTATGACTTATGACGTAATTATCATCGGTGCAGGATTAGTAGGATTAGGGGTTGCCAGTGCATTACAAGAAAGCCAACCTGAGCTTAAAGTACTGGTGATTGATAAGGAATCTGGCCCCGCCGTTCATCAAAGTGGCCATAACAGCAATGTTGTTCATTCGGGGATTTACTATACACCAGGAAGCTTAAAGGCAAGACTCGCTAAGCAAGGTAACATCACGACTTACAATTTTTGTAAACAGCATCATCTCTATTACGATCGTTGTGGCAAGGTGATTGTGGCAACTGATGAAAAAGAGCTACCAGCATTAGAAAATATCTATCAACGTGGAATACAAAATGGCCTTGAAGTAATTAAAATGACCGAGAGCGAGCTAAAAGCCAGGGAGCCTTATGTTAATGGTATTGCTGCTTTGCTTGTTCCTGATGCCGGTATTGTCAATTATCCGGAAATTGCCGCCAAACACGTTGAAATCATTCAAGCTCGAGGTGGAGTATTTGCCTTTAACCAAGCAGTAAATGCGATTAATGAAACGGACGAAACGGTAACAGTCACCACATCTACAACACAATTTACCGCAAAGTGGCTGATTAATTGTGCTGGATTATTTAGTGATCGGGTAGCAAAAATGGCGGGCTACGATACCGGCATGAAGATAGTTCCCTTTCGTGGTGAATATTTTATGCTCAACTCAAATAAAAATTATTTAGTTAATCATCTTATTTATCCTGTGCCGAATCCTGATTTCCCATTTTTAGGTGTCCATTTTACACGTATGTATAACGGGCATCGTGACGTAGGCCCTAATGCCGTATTAGCCTTTAAACGTGAAGGCTACAAGAAAAGTGATATTGACTTAAAAGATCTCACTGAAGTACTAACCTATAAAGGATTTTGGAAAATAGCCGGAAATTATTTAGGTGAAGGGATGGCCGAATTACGTCGTTCCTATTCACGTAAGCTGTTTGCCCAAAATGCACAAAAGCTTATTCCTGCTCTACGTGAAGCAGATATTCACCCAGGCCCGGCAGGTGTACGCGCCCAAGCTTTAACTCGCGAAGGAAAATTAGTCGATGATTTTCACTTTGTTAAAGGCAAACGTTCATTACATGTATGTAATGCCCCTTCTCCGGCCGCAACAGCATCAATTGAAATTGGTCGTGAAATTGTAAGAGAGCATTTTTTATTATAAAAAATCTTTCGTCTCACTCGCAGAGTGTCTCCCGTTGTCTGCGAGTGAGC
