Orthogroup:group_167


Homologs in group_167

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02620 FBDBKF_02620 Morganella morganii S1 dadA Glycine/D-amino acid oxidase (deaminating)
EHELCC_03090 EHELCC_03090 Morganella morganii S2 dadA Glycine/D-amino acid oxidase (deaminating)
NLDBIP_00370 NLDBIP_00370 Morganella morganii S4 dadA Glycine/D-amino acid oxidase (deaminating)
LHKJJB_01665 LHKJJB_01665 Morganella morganii S3 dadA Glycine/D-amino acid oxidase (deaminating)
HKOGLL_01705 HKOGLL_01705 Morganella morganii S5 dadA Glycine/D-amino acid oxidase (deaminating)
F4V73_RS05080 F4V73_RS05080 Morganella psychrotolerans - FAD-binding oxidoreductase
PMI_RS10590 PMI_RS10590 Proteus mirabilis HI4320 - FAD-dependent oxidoreductase
PMI_RS14000 PMI_RS14000 Proteus mirabilis HI4320 - FAD-dependent oxidoreductase
PMI_RS15210 PMI_RS15210 Proteus mirabilis HI4320 - TIGR03364 family FAD-dependent oxidoreductase

Distribution of group_167 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_167 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_167

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_167.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dadA 5
2 - 4

Product

# Product Occurence
1 Glycine/D-amino acid oxidase (deaminating) 5
2 FAD-binding oxidoreductase 1
3 FAD-dependent oxidoreductase 2
4 TIGR03364 family FAD-dependent oxidoreductase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0665 9 E Amino acid transport and metabolism (E) Glycine/D-amino acid oxidase (deaminating)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K27877 1 2-(methylaminoethyl)phosphonate oxidase [EC:1.5.3.27] Phosphonate and phosphinate metabolism
Metabolic pathways
Microbial metabolism in diverse environments		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01266 9 FAD dependent oxidoreductase

Annotations of the 107 SwissProt hits

Annotation Number of occurrences
4-methylaminobutanoate oxidase (formaldehyde-forming) 1
Bifunctional protein ThiO/ThiG 1
D-amino acid dehydrogenase 35
D-amino-acid oxidase 1
Dimethylglycine dehydrogenase, mitochondrial 3
Dimethylglycine oxidase 1
Gamma-glutamylputrescine oxidoreductase 1
Glycerol 3-phosphate dehydrogenase 1
Glycerol 3-phosphate oxidase 1
Glycine oxidase 3
Monomeric sarcosine oxidase 4
N-methyl-L-tryptophan oxidase 26
Opine oxidase subunit B 1
Peroxisomal sarcosine oxidase 3
Probable oxidoreductase OrdL 1
Protein FixC 1
Putative sarcosine oxidase 1
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial 2
Sarcosine dehydrogenase, mitochondrial 3
Sarcosine oxidase subunit beta 5
Uncharacterized oxidoreductase y4sL 1
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 11

Protein length

Min length 375
Max length 474
Mean length (sd) 462.6 (32.8)
Median length 474.0

Protein length distribution