Orthogroup:group_1055



Homologs in group_1055

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05975 FBDBKF_05975 Morganella morganii S1 rseP sigma E protease regulator RseP
EHELCC_09020 EHELCC_09020 Morganella morganii S2 rseP sigma E protease regulator RseP
NLDBIP_09400 NLDBIP_09400 Morganella morganii S4 rseP sigma E protease regulator RseP
LHKJJB_08355 LHKJJB_08355 Morganella morganii S3 rseP sigma E protease regulator RseP
HKOGLL_07905 HKOGLL_07905 Morganella morganii S5 rseP sigma E protease regulator RseP
F4V73_RS15920 F4V73_RS15920 Morganella psychrotolerans rseP sigma E protease regulator RseP
PMI_RS11250 PMI_RS11250 Proteus mirabilis HI4320 rseP sigma E protease regulator RseP

Distribution of group_1055 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1055 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1055

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1055.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rseP 7

Product

# Product Occurence
1 sigma E protease regulator RseP 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0750 7 OK Posttranslational modification, protein turnover, chaperones (O)
Transcription (K)
Membrane-associated protease RseP, regulator of RpoE activity

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11749 7 regulator of sigma E protease [EC:3.4.24.-] Cell cycle - Caulobacter -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02163 7 Peptidase family M50
PF17820 7 PDZ domain

Annotations of the 77 SwissProt hits

Annotation Number of occurrences
26S proteasome non-ATPase regulatory subunit 9 1
Membrane metalloprotease ARASP, chloroplastic 1
Metalloprotease MmpA 1
Probable membrane metalloprotease ARASP2, chloroplastic 1
Probable periplasmic serine endoprotease DegP-like 1
Probable protease eep 1
Protease RseP 1
Protease RseP (Fragment) 1
Putative zinc metalloprotease Atu1380 1
Putative zinc metalloprotease BB_0118 1
Putative zinc metalloprotease BH06270 1
Putative zinc metalloprotease BMEI0829 1
Putative zinc metalloprotease BR1156/BS1330_I1152 1
Putative zinc metalloprotease CA_C1796 1
Putative zinc metalloprotease CPE1693 1
Putative zinc metalloprotease CPn_0344/CP_0416/CPj0344/CpB0350 1
Putative zinc metalloprotease CT_072 1
Putative zinc metalloprotease Cj1068 1
Putative zinc metalloprotease DR_1507 1
Putative zinc metalloprotease FN1322 1
Putative zinc metalloprotease HP_0258 1
Putative zinc metalloprotease LL2128 1
Putative zinc metalloprotease Lin1355 1
Putative zinc metalloprotease Lmo1318 1
Putative zinc metalloprotease M6_Spy1682 1
Putative zinc metalloprotease MW1145 1
Putative zinc metalloprotease NMA0084 1
Putative zinc metalloprotease NMB0183 1
Putative zinc metalloprotease PA3649 1
Putative zinc metalloprotease PD_0327 1
Putative zinc metalloprotease PM1991 1
Putative zinc metalloprotease R01501 1
Putative zinc metalloprotease RC0203 1
Putative zinc metalloprotease RP161 1
Putative zinc metalloprotease RSc1411 1
Putative zinc metalloprotease SA1105 1
Putative zinc metalloprotease SACOL1281 1
Putative zinc metalloprotease SAR1238 1
Putative zinc metalloprotease SAS1196 1
Putative zinc metalloprotease SAV1262 1
Putative zinc metalloprotease SCO5695 1
Putative zinc metalloprotease SP_0263 1
Putative zinc metalloprotease SPs1691 1
Putative zinc metalloprotease SPy_1963/M5005_Spy1674 1
Putative zinc metalloprotease SpyM3_1689 1
Putative zinc metalloprotease TC_0344 1
Putative zinc metalloprotease TM_0890 1
Putative zinc metalloprotease TP_0600 1
Putative zinc metalloprotease VC_2253 1
Putative zinc metalloprotease XF_1047 1
Putative zinc metalloprotease all3971 1
Putative zinc metalloprotease aq_1964 1
Putative zinc metalloprotease jhp_0242 1
Putative zinc metalloprotease mll0638 1
Putative zinc metalloprotease slr1821 1
Putative zinc metalloprotease spr0242 1
Putative zinc metalloprotease spyM18_2031 1
Regulator of sigma E protease 4
Regulator of sigma-E protease RseP 2
Regulator of sigma-W protease RasP 1
Serine protease HTRA1 1
SpoIVB peptidase 1
Zinc metalloprotease RasP 5
Zinc metalloprotease Rip1 6

Protein length

Min length 450
Max length 451
Mean length (sd) 450.9 (0.4)
Median length 451.0

Protein length distribution