PF01047


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01047, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 28 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01047
Description MarR family

Occurence in the database

PF01047 is associated with 28 different proteins (see tab "Protein list" and "Profile")
The 28 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_330 FBDBKF_09930 83047 84282 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
1 group_1571 FBDBKF_10180 128434 128949 1 mprA transcriptional repressor MprA Morganella morganii S1
2 group_1673 FBDBKF_11630 121861 122283 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S1
3 group_1847 FBDBKF_13815 56602 57033 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S1
4 group_330 EHELCC_04730 275012 276247 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
5 group_1571 EHELCC_04980 320399 320914 1 mprA transcriptional repressor MprA Morganella morganii S2
6 group_1847 EHELCC_11485 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S2
7 group_1673 EHELCC_17550 20204 20626 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S2
8 group_330 NLDBIP_04730 274808 276043 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
9 group_1571 NLDBIP_04980 320195 320710 1 mprA transcriptional repressor MprA Morganella morganii S4
10 group_1847 NLDBIP_11830 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S4
11 group_1673 NLDBIP_18760 20951 21373 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S4
12 group_1847 LHKJJB_11690 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S3
13 group_1571 LHKJJB_13650 14668 15183 -1 mprA transcriptional repressor MprA Morganella morganii S3
14 group_330 LHKJJB_13900 59335 60570 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
15 group_1673 LHKJJB_17990 20204 20626 -1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S3
16 group_1847 HKOGLL_10300 141478 141909 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella morganii S5
17 group_330 HKOGLL_12635 83828 85063 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
18 group_1571 HKOGLL_12885 129215 129730 1 mprA transcriptional repressor MprA Morganella morganii S5
19 group_1673 HKOGLL_18660 3605 4027 1 marR DNA-binding transcriptional regulator, MarR family Morganella morganii S5
20 group_1571 F4V73_RS00160 42168 42683 -1 mprA transcriptional repressor MprA Morganella psychrotolerans
21 group_330 F4V73_RS00420 88341 89576 -1 ROK family protein Morganella psychrotolerans
22 group_1847 F4V73_RS12680 135004 135441 -1 hpaR homoprotocatechuate degradation operon regulator HpaR Morganella psychrotolerans
23 group_1847 PMI_RS01205 295772 296209 1 hpaR homoprotocatechuate degradation operon regulator HpaR Proteus mirabilis HI4320
24 group_1571 PMI_RS02005 472371 472898 -1 mprA transcriptional repressor MprA Proteus mirabilis HI4320
25 group_330 PMI_RS02265 521124 522356 -1 N-acetylglucosamine repressor Proteus mirabilis HI4320
26 group_1018 PMI_RS06715 1468403 1468831 -1 slyA transcriptional regulator SlyA Proteus mirabilis HI4320
27 group_758 PMI_RS17975 3949917 3950393 1 MarR family transcriptional regulator Proteus mirabilis HI4320