Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K12519
Protein list: lists the 22 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_409 | FBDBKF_09030 | 19854 | 20612 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S1 |
1 | group_409 | EHELCC_10380 | 125492 | 126250 | 1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S2 |
2 | group_409 | NLDBIP_10725 | 103763 | 104521 | 1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S4 |
3 | group_409 | LHKJJB_10630 | 87007 | 87765 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S3 |
4 | group_409 | HKOGLL_13690 | 20308 | 21066 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S5 |
5 | group_17 | FBDBKF_08980 | 11391 | 12149 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S1 |
6 | group_17 | EHELCC_10430 | 133955 | 134713 | 1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S2 |
7 | group_17 | NLDBIP_10775 | 112226 | 112984 | 1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S4 |
8 | group_17 | LHKJJB_10580 | 78544 | 79302 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S3 |
9 | group_17 | HKOGLL_13640 | 11845 | 12603 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S5 |
10 | group_17 | FBDBKF_18150 | 29898 | 30632 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S1 |
11 | group_17 | EHELCC_16850 | 29898 | 30632 | -1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S2 |
12 | group_17 | NLDBIP_17600 | 25134 | 25868 | 1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S4 |
13 | group_17 | LHKJJB_17520 | 25134 | 25868 | 1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S3 |
14 | group_17 | HKOGLL_17335 | 25134 | 25868 | 1 | fimC | P pilus assembly protein, chaperone PapD | Morganella morganii S5 |
15 | group_17 | F4V73_RS10355 | 180902 | 181636 | -1 | molecular chaperone | Morganella psychrotolerans | |
16 | group_409 | F4V73_RS10940 | 330749 | 331501 | 1 | fimbria/pilus periplasmic chaperone | Morganella psychrotolerans | |
17 | group_17 | F4V73_RS10985 | 338840 | 339598 | 1 | fimbria/pilus periplasmic chaperone | Morganella psychrotolerans | |
18 | group_409 | PMI_RS01290 | 315213 | 315971 | 1 | mrpD | MR/P fimbria assembly chaperone MrpD | Proteus mirabilis HI4320 |
19 | group_17 | PMI_RS01445 | 356913 | 357644 | 1 | fimbria/pilus periplasmic chaperone | Proteus mirabilis HI4320 | |
20 | group_17 | PMI_RS09275 | 2028075 | 2028839 | 1 | molecular chaperone | Proteus mirabilis HI4320 | |
21 | group_17 | PMI_RS10940 | 2408042 | 2408752 | -1 | fimbria/pilus periplasmic chaperone | Proteus mirabilis HI4320 |