Orthogroup:group_17


Homologs in group_17

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19 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04800 FBDBKF_04800 Morganella morganii S1 uraA Xanthine/uracil permease
FBDBKF_12070 FBDBKF_12070 Morganella morganii S1 pbuX Xanthine/uracil permease
FBDBKF_16205 FBDBKF_16205 Morganella morganii S1 pbuX Xanthine/uracil permease
EHELCC_06090 EHELCC_06090 Morganella morganii S2 uraA Xanthine/uracil permease
EHELCC_14235 EHELCC_14235 Morganella morganii S2 pbuX Xanthine/uracil permease
EHELCC_16240 EHELCC_16240 Morganella morganii S2 pbuX Xanthine/uracil permease
NLDBIP_06410 NLDBIP_06410 Morganella morganii S4 uraA Xanthine/uracil permease
NLDBIP_15330 NLDBIP_15330 Morganella morganii S4 pbuX Xanthine/uracil permease
NLDBIP_17100 NLDBIP_17100 Morganella morganii S4 pbuX Xanthine/uracil permease
LHKJJB_03290 LHKJJB_03290 Morganella morganii S3 uraA Xanthine/uracil permease
LHKJJB_15280 LHKJJB_15280 Morganella morganii S3 pbuX Xanthine/uracil permease
LHKJJB_17020 LHKJJB_17020 Morganella morganii S3 pbuX Xanthine/uracil permease
HKOGLL_06765 HKOGLL_06765 Morganella morganii S5 uraA Xanthine/uracil permease
HKOGLL_14400 HKOGLL_14400 Morganella morganii S5 pbuX Xanthine/uracil permease
HKOGLL_16820 HKOGLL_16820 Morganella morganii S5 pbuX Xanthine/uracil permease
F4V73_RS09270 F4V73_RS09270 Morganella psychrotolerans - nucleobase:cation symporter-2 family protein
F4V73_RS14575 F4V73_RS14575 Morganella psychrotolerans - uracil-xanthine permease family protein
F4V73_RS17400 F4V73_RS17400 Morganella psychrotolerans - nucleobase:cation symporter-2 family protein
PMI_RS14175 PMI_RS14175 Proteus mirabilis HI4320 - uracil-xanthine permease family protein

Distribution of group_17 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_17 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_17

Orthogroup content: 19 members

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This page summarizes the annotation of all members of the orthologous group group_17.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 uraA 5
2 pbuX 10
3 - 4

Product

# Product Occurence
1 Xanthine/uracil permease 15
2 nucleobase:cation symporter-2 family protein 2
3 uracil-xanthine permease family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2233 19 F Nucleotide transport and metabolism (F) Xanthine/uracil permease

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K16345 7 xanthine permease XanP - -
K16346 12 xanthine permease XanQ - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00860 19 Permease family

Annotations of the 46 SwissProt hits

Annotation Number of occurrences
Nucleobase transporter PlUacP 1
Nucleobase-ascorbate transporter 1 1
Nucleobase-ascorbate transporter 11 1
Nucleobase-ascorbate transporter 12 1
Nucleobase-ascorbate transporter 2 1
Nucleobase-ascorbate transporter 3 1
Nucleobase-ascorbate transporter 4 1
Nucleobase-ascorbate transporter 5 1
Nucleobase-ascorbate transporter 6 1
Nucleobase-ascorbate transporter 7 1
Nucleobase-ascorbate transporter 8 1
Nucleobase-ascorbate transporter LPE1 1
Probable uracil permease 2
Purine permease 1
Putative nucleobase-ascorbate transporter 10 1
Putative purine permease C1399.01c 1
Putative purine permease CPE0397 1
Putative purine permease YbbY 1
Putative purine permease YwdJ 1
Putative pyrimidine permease RutG 1
Solute carrier family 23 member 1 3
Solute carrier family 23 member 2 4
Solute carrier family 23 member 3 1
Uracil permease 5
Uric acid permease PucJ 1
Uric acid permease PucK 1
Uric acid transporter UacT 1
Uric acid-xanthine permease 1
Xanthine permease 1
Xanthine permease XanP 4
Xanthine permease XanQ 3

Protein length

Min length 461
Max length 493
Mean length (sd) 472.8 (14.3)
Median length 466.0

Protein length distribution