Orthogroup:group_17


Homologs in group_17

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16 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08980 FBDBKF_08980 Morganella morganii S1 fimC P pilus assembly protein, chaperone PapD
FBDBKF_18150 FBDBKF_18150 Morganella morganii S1 fimC P pilus assembly protein, chaperone PapD
EHELCC_10430 EHELCC_10430 Morganella morganii S2 fimC P pilus assembly protein, chaperone PapD
EHELCC_16850 EHELCC_16850 Morganella morganii S2 fimC P pilus assembly protein, chaperone PapD
NLDBIP_10775 NLDBIP_10775 Morganella morganii S4 fimC P pilus assembly protein, chaperone PapD
NLDBIP_17600 NLDBIP_17600 Morganella morganii S4 fimC P pilus assembly protein, chaperone PapD
LHKJJB_10580 LHKJJB_10580 Morganella morganii S3 fimC P pilus assembly protein, chaperone PapD
LHKJJB_17520 LHKJJB_17520 Morganella morganii S3 fimC P pilus assembly protein, chaperone PapD
HKOGLL_13640 HKOGLL_13640 Morganella morganii S5 fimC P pilus assembly protein, chaperone PapD
HKOGLL_17335 HKOGLL_17335 Morganella morganii S5 fimC P pilus assembly protein, chaperone PapD
F4V73_RS10355 F4V73_RS10355 Morganella psychrotolerans - molecular chaperone
F4V73_RS10985 F4V73_RS10985 Morganella psychrotolerans - fimbria/pilus periplasmic chaperone
PMI_RS01445 PMI_RS01445 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone
PMI_RS05170 PMI_RS05170 Proteus mirabilis HI4320 - fimbrial chaperone
PMI_RS09275 PMI_RS09275 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS10940 PMI_RS10940 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone

Distribution of group_17 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_17 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_17

Orthogroup content: 16 members

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This page summarizes the annotation of all members of the orthologous group group_17.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimC 10
2 - 6

Product

# Product Occurence
1 P pilus assembly protein, chaperone PapD 10
2 molecular chaperone 2
3 fimbria/pilus periplasmic chaperone 3
4 fimbrial chaperone 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3121 16 W Extracellular structures (W) P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07346 1 fimbrial chaperone protein Two-component system -
K12519 15 chaperone protein PapD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00345 16 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 16 Pili assembly chaperone PapD, C-terminal domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042586 1 fimbria/pilus periplasmic chaperone VF1149 Adherence
VFG042612 1 molecular chaperone VF1236 Adherence
VFG042634 6 MrfD VF1232 Adherence

Annotations of the 39 SwissProt hits

Annotation Number of occurrences
Chaperone protein AfaB 1
Chaperone protein AggD 1
Chaperone protein CS3-1 1
Chaperone protein ClpE 1
Chaperone protein CssC 2
Chaperone protein FaeE 1
Chaperone protein FanE 1
Chaperone protein FimB/FhaD 1
Chaperone protein FimC 3
Chaperone protein FocC 2
Chaperone protein HifB 2
Chaperone protein LpfB 1
Chaperone protein MrkB 1
Chaperone protein MyfB 1
Chaperone protein NfaE 1
Chaperone protein PapD 1
Chaperone protein PmfD 1
Chaperone protein PrsD (Fragment) 1
Chaperone protein PsaB 2
Chaperone protein SefB 1
Chaperone protein caf1M 1
Probable fimbrial chaperone LpfB 1
Probable fimbrial chaperone SfmC 1
Probable fimbrial chaperone YadV 1
Probable fimbrial chaperone YehC 1
Probable fimbrial chaperone YfcS 1
Probable fimbrial chaperone YraI 1
Probable fimbrial chaperone protein ElfD 2
Uncharacterized fimbrial chaperone YbgP 1
Uncharacterized fimbrial chaperone YcbF 1
Uncharacterized fimbrial chaperone YhcA 1
Uncharacterized fimbrial chaperone YqiH 1

Protein length

Min length 222
Max length 254
Mean length (sd) 245.7 (8.1)
Median length 244.0

Protein length distribution