Orthogroup:group_409


Homologs in group_409

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16960 FBDBKF_16960 Morganella morganii S1 udp uridine phosphorylase
EHELCC_16630 EHELCC_16630 Morganella morganii S2 udp uridine phosphorylase
NLDBIP_16840 NLDBIP_16840 Morganella morganii S4 udp uridine phosphorylase
LHKJJB_16630 LHKJJB_16630 Morganella morganii S3 udp uridine phosphorylase
HKOGLL_17595 HKOGLL_17595 Morganella morganii S5 udp uridine phosphorylase
F4V73_RS18430 F4V73_RS18430 Morganella psychrotolerans udp uridine phosphorylase
PMI_RS05885 PMI_RS05885 Proteus mirabilis HI4320 - AMP nucleosidase
PMI_RS17555 PMI_RS17555 Proteus mirabilis HI4320 udp uridine phosphorylase

Distribution of group_409 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_409 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_409

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_409.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 udp 7
2 - 1

Product

# Product Occurence
1 uridine phosphorylase 7
2 AMP nucleosidase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0775 1 FH Nucleotide transport and metabolism (F)
Coenzyme transport and metabolism (H)		 Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB
COG2820 7 F Nucleotide transport and metabolism (F) Uridine phosphorylase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01048 8 Phosphorylase superfamily
PF10423 1 Bacterial AMP nucleoside phosphorylase N-terminus

Annotations of the 231 SwissProt hits

Annotation Number of occurrences
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 8
AMP nucleosidase 2
Guanosine phosphorylase 1
Inactive uridine phosphorylase B 1
Purine nucleoside phosphorylase 4
Purine nucleoside phosphorylase DeoD-type 186
Purine nucleoside phosphorylase DeoD-type (Fragment) 1
Purine nucleoside phosphorylase DeoD-type 1 7
Purine nucleoside phosphorylase DeoD-type 2 7
Uridine and thymidine phosphorylase 1
Uridine phosphorylase 8
Uridine phosphorylase 1 2
Uridine phosphorylase 2 2
Uridine phosphorylase A 1

Protein length

Min length 251
Max length 483
Mean length (sd) 280.1 (82.0)
Median length 251.0

Protein length distribution