COG5002

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG5002
Protein list: lists the 22 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description Sensor histidine kinase WalK
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG5002 is associated with 22 different proteins
The 22 proteins are classified into 4 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1812 FBDBKF_12335 130145 131515 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S1
1 group_365 FBDBKF_16475 18096 19457 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S1
2 group_2301 FBDBKF_17430 17305 18600 -1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S1
3 group_365 EHELCC_08340 135082 136443 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S2
4 group_1812 EHELCC_13970 3190 4560 -1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S2
5 group_2301 EHELCC_17325 17305 18600 -1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S2
6 group_365 NLDBIP_08665 135082 136443 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S4
7 group_1812 NLDBIP_15065 7127 8497 -1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S4
8 group_2301 NLDBIP_17870 24196 25491 1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S4
9 group_365 LHKJJB_05600 120716 122077 1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S3
10 group_1812 LHKJJB_15545 130145 131515 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S3
11 group_2301 LHKJJB_17790 24194 25489 1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S3
12 group_365 HKOGLL_05315 119673 121034 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S5
13 group_1812 HKOGLL_14665 116808 118178 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S5
14 group_2301 HKOGLL_17800 24194 25489 1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S5
15 group_365 F4V73_RS02990 634008 635378 -1 baeS two-component system sensor histidine kinase BaeS Morganella psychrotolerans
16 group_719 F4V73_RS03910 828333 829730 -1 Cu(+)/Ag(+) sensor histidine kinase Morganella psychrotolerans
17 group_2301 F4V73_RS16605 141038 142333 -1 phoR phosphate regulon sensor histidine kinase PhoR Morganella psychrotolerans
18 group_1812 F4V73_RS17165 64599 65969 1 cpxA envelope stress sensor histidine kinase CpxA Morganella psychrotolerans
19 group_2301 PMI_RS00255 79657 80949 1 phoR phosphate regulon sensor histidine kinase PhoR Proteus mirabilis HI4320
20 group_365 PMI_RS07745 1695686 1697062 1 baeS two-component system sensor histidine kinase BaeS Proteus mirabilis HI4320
21 group_1812 PMI_RS15815 3512374 3513741 -1 cpxA envelope stress sensor histidine kinase CpxA Proteus mirabilis HI4320