Orthogroup:group_2301


Homologs in group_2301

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17685 FBDBKF_17685 Morganella morganii S1 nfi deoxyribonuclease V
EHELCC_18170 EHELCC_18170 Morganella morganii S2 nfi deoxyribonuclease V
NLDBIP_17980 NLDBIP_17980 Morganella morganii S4 nfi deoxyribonuclease V
LHKJJB_18175 LHKJJB_18175 Morganella morganii S3 nfi deoxyribonuclease V
HKOGLL_18025 HKOGLL_18025 Morganella morganii S5 nfi deoxyribonuclease V
F4V73_RS15065 F4V73_RS15065 Morganella psychrotolerans nfi deoxyribonuclease V
PMI_RS13695 PMI_RS13695 Proteus mirabilis HI4320 nfi deoxyribonuclease V

Distribution of group_2301 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2301 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2301

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2301.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nfi 7

Product

# Product Occurence
1 deoxyribonuclease V 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1515 7 L Replication, recombination and repair (L) Deoxyinosine 3'-endonuclease (endonuclease V)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05982 7 deoxyribonuclease V [EC:3.1.21.7] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04493 7 Endonuclease V

Annotations of the 132 SwissProt hits

Annotation Number of occurrences
Bifunctional methyltransferase-like/endonuclease 1
Bifunctional methyltransferase/endonuclease 3
Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase 1
Endonuclease V 126
Putative endonuclease C1F12.06c 1

Protein length

Min length 222
Max length 247
Mean length (sd) 243.4 (9.4)
Median length 247.0

Protein length distribution