COG3829

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG3829
Protein list: lists the 45 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains
Function(s) descr. Transcription (K)
Signal transduction mechanisms (T)

Occurence in the database

COG3829 is associated with 45 different proteins
The 45 proteins are classified into 7 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_624 FBDBKF_01340 261037 261834 1 Fis family transcriptional regulator Morganella morganii S1
1 group_2559 FBDBKF_02315 150962 152485 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S1
2 group_2613 FBDBKF_02925 278648 280261 -1 prpR propionate catabolism operon regulatory protein PrpR Morganella morganii S1
3 group_855 FBDBKF_03640 130988 132595 1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S1
4 group_1072 FBDBKF_05615 129917 130903 1 pspF phage shock protein operon transcriptional activator Morganella morganii S1
5 group_2791 FBDBKF_07775 75987 77837 1 AAA domain-containing protein Morganella morganii S1
6 group_2871 FBDBKF_10630 89303 90949 1 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S1
7 group_624 EHELCC_00205 47034 47831 -1 Fis family transcriptional regulator Morganella morganii S2
8 group_2559 EHELCC_02785 538782 540305 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S2
9 group_2613 EHELCC_03395 666468 668081 -1 prpR propionate catabolism operon regulatory protein PrpR Morganella morganii S2
10 group_855 EHELCC_06895 114508 116115 -1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S2
11 group_1072 EHELCC_11975 50591 51577 -1 pspF phage shock protein operon transcriptional activator Morganella morganii S2
12 group_2791 EHELCC_13605 50181 52031 1 AAA domain-containing protein Morganella morganii S2
13 group_2871 EHELCC_14965 89293 90939 1 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S2
14 group_2613 NLDBIP_00065 12055 13668 1 prpR propionate catabolism operon regulatory protein PrpR Morganella morganii S4
15 group_2559 NLDBIP_00675 139831 141354 1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S4
16 group_624 NLDBIP_03255 632305 633102 1 Fis family transcriptional regulator Morganella morganii S4
17 group_855 NLDBIP_07220 114381 115988 -1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S4
18 group_1072 NLDBIP_12315 50546 51532 -1 pspF phage shock protein operon transcriptional activator Morganella morganii S4
19 group_2791 NLDBIP_14050 71056 72906 1 AAA domain-containing protein Morganella morganii S4
20 group_2871 NLDBIP_14795 89293 90939 1 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S4
21 group_2559 LHKJJB_01360 251331 252854 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S3
22 group_2613 LHKJJB_01970 379017 380630 -1 prpR propionate catabolism operon regulatory protein PrpR Morganella morganii S3
23 group_624 LHKJJB_04770 239546 240343 1 Fis family transcriptional regulator Morganella morganii S3
24 group_855 LHKJJB_06755 78127 79734 -1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S3
25 group_2791 LHKJJB_08800 86843 88693 -1 AAA domain-containing protein Morganella morganii S3
26 group_1072 LHKJJB_12175 50591 51577 -1 pspF phage shock protein operon transcriptional activator Morganella morganii S3
27 group_2871 LHKJJB_14550 50787 52433 -1 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S3
28 group_2559 HKOGLL_01400 256842 258365 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S5
29 group_2613 HKOGLL_02010 384528 386141 -1 prpR propionate catabolism operon regulatory protein PrpR Morganella morganii S5
30 group_624 HKOGLL_02275 47239 48036 -1 Fis family transcriptional regulator Morganella morganii S5
31 group_855 HKOGLL_04175 153653 155260 1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S5
32 group_2791 HKOGLL_08350 86843 88693 -1 AAA domain-containing protein Morganella morganii S5
33 group_1072 HKOGLL_10790 50591 51577 -1 pspF phage shock protein operon transcriptional activator Morganella morganii S5
34 group_2871 HKOGLL_13170 50787 52433 -1 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S5
35 group_624 F4V73_RS02330 494241 495050 -1 hypothetical protein Morganella psychrotolerans
36 group_1072 F4V73_RS03690 784077 785093 -1 pspF phage shock protein operon transcriptional activator Morganella psychrotolerans
37 group_2559 F4V73_RS04690 989312 990832 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella psychrotolerans
38 group_2613 F4V73_RS05370 1138799 1140409 -1 prpR propionate catabolism operon regulatory protein PrpR Morganella psychrotolerans
39 group_855 F4V73_RS11225 386033 387670 -1 sigma 54-interacting transcriptional regulator Morganella psychrotolerans
40 group_2791 F4V73_RS13270 280123 282030 -1 sigma 54-interacting transcriptional regulator Morganella psychrotolerans
41 group_2871 F4V73_RS14340 91790 93427 1 sigma 54-interacting transcriptional regulator Morganella psychrotolerans
42 group_624 PMI_RS03635 817147 817935 -1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
43 group_1072 PMI_RS06650 1454644 1455648 1 pspF phage shock protein operon transcriptional activator Proteus mirabilis HI4320
44 group_855 PMI_RS17810 3913195 3914808 -1 sigma 54-interacting transcriptional regulator Proteus mirabilis HI4320