Orthogroup:group_2589


Homologs in group_2589

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02925 FBDBKF_02925 Morganella morganii S1 prpR propionate catabolism operon regulatory protein PrpR
EHELCC_03395 EHELCC_03395 Morganella morganii S2 prpR propionate catabolism operon regulatory protein PrpR
NLDBIP_00065 NLDBIP_00065 Morganella morganii S4 prpR propionate catabolism operon regulatory protein PrpR
LHKJJB_01970 LHKJJB_01970 Morganella morganii S3 prpR propionate catabolism operon regulatory protein PrpR
HKOGLL_02010 HKOGLL_02010 Morganella morganii S5 prpR propionate catabolism operon regulatory protein PrpR
F4V73_RS05370 F4V73_RS05370 Morganella psychrotolerans prpR propionate catabolism operon regulatory protein PrpR

Distribution of group_2589 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2589 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2589

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2589.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 prpR 6

Product

# Product Occurence
1 propionate catabolism operon regulatory protein PrpR 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3829 6 KT Transcription (K)
Signal transduction mechanisms (T)		 RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02688 6 transcriptional regulator, propionate catabolism operon regulatory protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00158 6 Sigma-54 interaction domain
PF02954 6 Bacterial regulatory protein, Fis family
PF06506 6 Propionate catabolism activator

Annotations of the 156 SwissProt hits

Annotation Number of occurrences
Acetoin catabolism regulatory protein 1
Acetoin dehydrogenase operon transcriptional activator AcoR 1
Alginate biosynthesis transcriptional regulatory protein AlgB 3
Anaerobic nitric oxide reductase transcription regulator NorR 52
C4-dicarboxylate transport transcriptional regulatory protein DctD 3
DNA-binding transcriptional activator HyfR 1
DNA-binding transcriptional regulator NtrC 10
Formate hydrogenlyase transcriptional activator 2
Formate hydrogenlyase transcriptional activator FhlA 1
Glycerol metabolism operon regulatory protein 1
HTH-type transcriptional regulatory protein TyrR 6
Hydrogenase transcriptional regulatory protein HoxA 2
Hydrogenase transcriptional regulatory protein HupR1 1
Limonene hydroxylase 1
Lon protease 2 1
Luminescence regulatory protein LuxO 2
Nif-specific regulatory protein 16
Nitric oxide reductase transcription regulator NorR1 1
Nitric oxide reductase transcription regulator NorR2 1
Nitrogen assimilation regulatory protein NtrX 1
Nitrogen fixation protein AnfA 1
Nitrogen fixation protein VnfA 1
PTS-dependent dihydroxyacetone kinase operon regulatory protein 1
Pathogenicity locus probable regulatory protein HrpR 1
Pathogenicity locus probable regulatory protein HrpS 2
Pathogenicity locus probable regulatory protein WtsA 1
Phenol regulator MopR 1
Phosphoglycerate transport system transcriptional regulatory protein PgtA 1
Propionate catabolism operon regulatory protein 2
Psp operon transcriptional activator 1
Putative response regulator NtrX-like 5
Putative sigma L-dependent transcriptional regulator YplP 1
Putative sigma L-dependent transcriptional regulator YqiR 1
Putative transcriptional regulatory protein y4pA 1
Putative uric acid sigma-54-dependent transcriptional regulator UacR 1
Regulatory protein AtoC 1
Regulatory protein LuxO 5
Response regulator protein FleR 1
Response regulator protein PilR 1
Sigma54-dependent transcriptional activator SfnR 1
Sigma54-dependent transcriptional regulator SfnR 1
Signal-transduction and transcriptional-control protein 1
Transcriptional activator RocR 1
Transcriptional regulator FleQ 1
Transcriptional regulator VasH 1
Transcriptional regulatory protein DagR 1
Transcriptional regulatory protein FlbD 1
Transcriptional regulatory protein FlgR 1
Transcriptional regulatory protein GlrR 1
Transcriptional regulatory protein LevR 1
Transcriptional regulatory protein QseF 1
Transcriptional regulatory protein RtcR 1
Transcriptional regulatory protein XylR 1
Transcriptional regulatory protein ZraR 5
Uncharacterized protein in HyuA 5'region (Fragment) 1

Protein length

Min length 536
Max length 537
Mean length (sd) 536.8 (0.4)
Median length 537.0

Protein length distribution