Orthogroup:group_198


Homologs in group_198

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11815 FBDBKF_11815 Morganella morganii S1 murP PTS N-acetylmuramic acid transporter subunit IIBC
EHELCC_14490 EHELCC_14490 Morganella morganii S2 murP PTS N-acetylmuramic acid transporter subunit IIBC
NLDBIP_15585 NLDBIP_15585 Morganella morganii S4 murP PTS N-acetylmuramic acid transporter subunit IIBC
LHKJJB_15025 LHKJJB_15025 Morganella morganii S3 murP PTS N-acetylmuramic acid transporter subunit IIBC
HKOGLL_14145 HKOGLL_14145 Morganella morganii S5 murP PTS N-acetylmuramic acid transporter subunit IIBC
F4V73_RS14840 F4V73_RS14840 Morganella psychrotolerans murP PTS N-acetylmuramic acid transporter subunit IIBC
PMI_RS01405 PMI_RS01405 Proteus mirabilis HI4320 treB PTS trehalose transporter subunit IIBC
PMI_RS10970 PMI_RS10970 Proteus mirabilis HI4320 - beta-glucoside-specific PTS transporter subunit IIABC
PMI_RS17475 PMI_RS17475 Proteus mirabilis HI4320 - PTS transporter subunit EIIC

Distribution of group_198 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_198 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_198

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_198.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 murP 6
2 treB 1
3 - 2

Product

# Product Occurence
1 PTS N-acetylmuramic acid transporter subunit IIBC 6
2 PTS trehalose transporter subunit IIBC 1
3 beta-glucoside-specific PTS transporter subunit IIABC 1
4 PTS transporter subunit EIIC 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1263 9 G Carbohydrate transport and metabolism (G) Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02757 1 beta-glucoside PTS system EIICBA component [EC:2.7.1.-] Phosphotransferase system (PTS) -
K02819 1 trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] Starch and sucrose metabolism
Phosphotransferase system (PTS)		 -
K11192 6 N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] Amino sugar and nucleotide sugar metabolism
Phosphotransferase system (PTS)		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00358 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PF00367 9 phosphotransferase system, EIIB
PF02378 9 Phosphotransferase system, EIIC

Annotations of the 128 SwissProt hits

Annotation Number of occurrences
Lactose permease 4
PTS system MurNAc-GlcNAc-specific EIIBC component 13
PTS system N-acetylglucosamine-specific EIIB component 1
PTS system N-acetylglucosamine-specific EIICB component 1
PTS system N-acetylglucosamine-specific EIICBA component 2
PTS system N-acetylmuramic acid-specific EIIBC component 14
PTS system alpha-glucoside-specific EIICB component 2
PTS system arbutin-, cellobiose-, and salicin-specific EIIBC component 1
PTS system beta-glucoside-specific EIIBCA component 4
PTS system glucosamine-specific EIICBA component 1
PTS system glucose-specific EIIA component 24
PTS system glucose-specific EIIBCA component 1
PTS system glucose-specific EIICBA component 24
PTS system glucose-specific EIICBA component (Fragment) 1
PTS system glucoside-specific EIICBA component 15
PTS system maltose-specific EIICB component 2
PTS system mannose-specific EIIBCA component 1
PTS system sucrose-specific EIIBC component 6
PTS system sucrose-specific EIIBCA component 2
PTS system trehalose-specific EIIBC component 2
Phosphotransferase enzyme IIA component PtsA 1
Phosphotransferase enzyme IIB component GlvB 2
Probable PTS system sucrose-specific EIIBC component 1
Putative PTS system EIIBC component YbbF 1
Putative phosphotransferase enzyme IIA component YyzE 1
Raffinose carrier protein 1

Protein length

Min length 454
Max length 629
Mean length (sd) 494.0 (51.5)
Median length 481.0

Protein length distribution