Orthogroup:group_198


Homologs in group_198

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8 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS10280 F4V73_RS10280 Morganella psychrotolerans - fimbrial protein
PMI_RS05775 PMI_RS05775 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10890 PMI_RS10890 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10895 PMI_RS10895 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10910 PMI_RS10910 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS12555 PMI_RS12555 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS16670 PMI_RS16670 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17140 PMI_RS17140 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_198 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_198 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_198

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_198.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 8

Product

# Product Occurence
1 fimbrial protein 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 8 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 3 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -
K07349 3 minor fimbrial subunit - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 7 Fimbrial protein

Annotations of the 63 SwissProt hits

Annotation Number of occurrences
F17 fimbrial protein 1
F7-2 fimbrial protein 2
Fimbria A protein 1
Fimbrial adapter PapK 2
Fimbrial protein 987P 1
Fimbrial protein FimX 1
Fimbrial subunit ElfA 1
Fimbrial subunit type 1 3
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 2
Laminin-binding fimbrial subunit ElfA 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 6
Major fimbrial subunit SMF-1 1
Minor fimbrial subunit HifD 2
PAP fimbrial minor pilin protein 1
PRS fimbrial major pilin protein (Fragment) 1
PRS fimbrial minor pilin protein 1
Pap fimbrial major pilin protein 1
Probable fimbrial subunit LpfE 1
Probable major fimbrial subunit LpfA 1
Protein FimF 1
Protein FimG 1
Protein LpfE 1
Protein PrsK 1
Putative fimbrin-like protein FimI 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial adhesin protein SfaS 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Serotype 2 fimbrial subunit 1
Serotype 3 fimbrial subunit 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmA 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YbgD 1
Uncharacterized fimbrial-like protein YcbU 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeR 1
Uncharacterized fimbrial-like protein YdeS 1
Uncharacterized fimbrial-like protein YehD 1
Uncharacterized fimbrial-like protein YfcV 1
Uncharacterized fimbrial-like protein YgiL 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Min length 165
Max length 216
Mean length (sd) 180.8 (16.3)
Median length 173.5

Protein length distribution