Homologs in group_3698

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS05775 PMI_RS05775 28.7 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10895 PMI_RS10895 31.8 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17140 PMI_RS17140 26.8 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3698

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3698

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77294 2.8e-19 82 32 4 152 3 ydeR Uncharacterized fimbrial-like protein YdeR Escherichia coli (strain K12)
P08190 5.64e-17 76 32 4 146 1 fimG Protein FimG Escherichia coli (strain K12)
P42185 3.93e-07 50 25 5 152 3 prsH PRS fimbrial minor pilin protein Escherichia coli
P07111 6.96e-07 50 25 5 152 1 papH PAP fimbrial minor pilin protein Escherichia coli
Q03011 3.13e-05 45 28 6 150 1 mrpA Major MR/P fimbria protein Proteus mirabilis (strain HI4320)
P53521 4.26e-05 45 33 4 96 3 pmfF Putative minor fimbrial subunit PmfF Proteus mirabilis (strain HI4320)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10890
Feature type CDS
Gene -
Product fimbrial protein
Location 2398666 - 2399163 (strand: -1)
Length 498 (nucleotides) / 165 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3698
Orthogroup size 4
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07349 minor fimbrial subunit - -

Protein Sequence

MWKSLTLFLLFSYSPIALSNTVNINVYGSVVASPCELETKNHLIDLKKINIRNIKNGQASDWIDFSIKLKNCPVNTEKVTMILRGQSVPNYSEYFINSGTAKDIALNLAMQNNKGIVKNNDKLMTAVNKYNHNAEFALSARMVGYGNNITVGSFKSHLEFTLIYN

Flanking regions ( +/- flanking 50bp)

TGTCCGCCAAAATAACAGCAACGCTTATTTATCAATAAAAAGAGGGTGTTATGTGGAAATCACTAACGTTATTTTTATTATTTTCATATTCTCCTATCGCATTAAGCAACACTGTTAATATTAATGTATATGGATCAGTAGTAGCCTCACCTTGTGAGTTAGAAACGAAAAACCACTTAATTGATTTAAAAAAAATCAATATTAGAAATATTAAAAATGGTCAAGCATCAGACTGGATAGATTTTTCTATAAAATTAAAAAATTGCCCAGTTAATACAGAGAAAGTCACTATGATTTTAAGAGGCCAAAGTGTTCCTAATTATTCGGAATATTTTATTAATAGTGGGACTGCTAAAGATATAGCACTAAATTTAGCAATGCAAAATAATAAAGGTATTGTAAAAAATAATGATAAATTAATGACGGCTGTTAATAAATATAACCATAATGCGGAATTTGCTTTATCGGCAAGAATGGTTGGCTATGGAAATAATATAACGGTGGGATCATTTAAGAGCCATCTTGAATTTACTCTTATTTATAATTAAATGTGTCATAAAGGGGTTTCAAGTGAATCGCTCTTATCCAGCATCAAAGA