Homologs in group_198

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7 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS05775 PMI_RS05775 15.2 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10890 PMI_RS10890 19.2 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10895 PMI_RS10895 19.4 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10910 PMI_RS10910 22.2 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS12555 PMI_RS12555 40.7 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS16670 PMI_RS16670 21.6 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17140 PMI_RS17140 17.4 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_198

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_198

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10280
Feature type CDS
Gene -
Product fimbrial protein
Location 166478 - 167128 (strand: -1)
Length 651 (nucleotides) / 216 (amino acids)
In genomic island GI65

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_198
Orthogroup size 8
N. genomes 2

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MQTLFCLLSIQNRQTYLPLINMRFIMFFSKKVISAAVLTGLMVSTAAFAAGEASKQGATVTFKAQLRDAACDVSSTTEGDTVDFGIFTIDKLGAAAADTQIGVTKDFSLVLTNCSKAADPAKVFVYADGQASNYSQKYFANKAAQSLAVQIFYGADAATGTTLIPNQATQLADITKVSEGTNASIPLKANLILTQAADAAKAEVMSVPVTFSVAYN

Flanking regions ( +/- flanking 50bp)

TGATATATAAATTTAGTGAAATAATATTAATGTTATTCCGTTGCCTTTATATGCAAACACTCTTCTGCCTGTTGTCTATTCAGAACAGACAGACGTACTTACCCTTAATAAATATGAGGTTTATTATGTTTTTTTCAAAAAAAGTAATTTCTGCTGCTGTTCTGACTGGTCTGATGGTATCTACTGCTGCATTTGCCGCTGGTGAAGCGTCTAAACAAGGGGCAACCGTCACCTTTAAAGCGCAGTTACGTGACGCTGCATGTGATGTCTCTTCAACCACCGAAGGTGACACCGTTGATTTCGGTATCTTTACTATTGATAAACTGGGTGCAGCCGCTGCTGACACTCAGATTGGGGTAACCAAAGATTTTAGTCTGGTGCTGACTAACTGCTCTAAAGCTGCTGATCCTGCAAAAGTATTTGTTTATGCTGACGGTCAGGCATCAAATTACTCTCAGAAATATTTTGCGAATAAAGCAGCACAGTCTCTTGCTGTTCAGATTTTCTATGGTGCTGATGCAGCAACAGGAACTACTCTTATTCCGAATCAGGCTACTCAATTAGCAGACATTACCAAAGTGTCAGAAGGAACAAACGCATCAATTCCGTTAAAAGCTAATTTAATACTGACCCAGGCAGCTGATGCTGCGAAAGCAGAAGTTATGAGTGTACCGGTAACTTTCAGCGTAGCATATAACTAATAAAATAAGATATATGTAACACTCAGAGGCTTGAAAAAGCCTCTGTATAT